Detail



ID : Ahg312525

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|312525|fgenesh1_pm.C_scaffold_1001305
Sequence
ATGGAAAACA CAGACGAACT TGTCTCCATT GAGCTACCAG CTCCTGCTTC ATGGAAGAAA CTGTTTTATC CGAAAAGAGC GGGTACTCCG AGAAAGACAG AGATTGTGTT TGTGGCTCCA ACGGGTGAAG AGATCAGCTC ACGGAAGCAG TTGGAACAGT ACCTCAAGGC CCATCCTGGC AATCCTCTCA TCTCTGAGTT TGAGTGGACA ACTGGGGAAA CTCCAAGGAG GTCTTCAAGG ATTAGCCAAA AGGTGAAGGC CACAACGCCT ACTCCTGACA AAGAACCCCT CCTGAAGAAG AGACGATCTT CTCTTACGAA GAAGGACAAT AAGGAGGCTG CTGAGAAAAA TGACGAGGCT GCTATGAAGG AGAACATGGA TGTTGACAAG GATGGAAAGA CGGAAAACGC AGAGAAGGAG AAGGAGGGAG TGACAGAAAT TGCAGAGGCA GAGAAGGAGA ACAAAGAGGG TGAGAAGGGG GAGAAGGAGG GTGAAAAGGC CGAGGCTGAG AACAAAGAGG CAGAAGTTGT GACTGACAAG AAAGAGTCCA TGGAAGTGGA TACCTTTGAG TTGGAGAAGA AGACTGAGAG TGGAGGAGGA GCTAAAGAAC CTTCCAAAGT TGAAGGCCTC AAGGACACTG AAATGAAAGA GCCTCAGGAT GTAGTTGCTG AGGGTGATGG AGAGAAGAAG CCTGCGGAGG AAAAGACTGA GAACAAGGGC AGCGTGACAA CAGAGGCTAA CGGAGAACCG AATGTGACCC CGGATGAACC TAATCTTGAT GCAGATGCTC AAGCAAATAA GGGAAAAGAA TCCAAAGAAT ATGATGAGAA GAAGAGTGAA GCTGAGGCAA ATAAGGAAAA TGACACTCAA GAATCTGATG AGAAGAAGAC AGAAGCTGCA GCAAATAAGG AGAACGAAAC CGAAGAATCT GATGTTAAGA AGACAGAAGC TGCAGCAGCA ACATCAGTAG CAGAGGAGAA GAGTAACGAC TTGAAGGCAG AAGACACAAA CAGAAGCTTG GAGGCGAATC AAGTTCAACA GCAGCAGGGC GCTGCAGCTT CCGTGAGCTG TTAA 
Length1074
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6186366.. 6187920
Download Sequence
A.thaliana
AGI-codeAT1G15340.1
Descriptionmethyl-CPG-binding domain 10
TAIR curator summaryProtein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.
Alias[MBD10][methyl-CPG-binding domain 10]
Gene coexpression
MR
MR Locus Description
3.74166 Ahg486240 Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein
8.83176 Ahg494868 Protein of unknown function (DUF1423)
14.3178 Ahg329112 Cytochrome b561/ferric reductase transmembrane protein family
17.9444 Ahg472531 Vacuolar sorting protein 39
18.3303 Ahg485317 ubiquitin-specific protease 26
22.9783 Ahg919535 SIT4 phosphatase-associated family protein
27.5681 Ahg477768 DNA-binding storekeeper protein-related transcriptional regulator
31.4166 Ahg495653 DEK domain-containing chromatin associated protein
31.4166 Ahg479444 ABRE binding factor 4
32.8634 Ahg338999 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression