| Annotation |
|---|
| Description | jgi|Araly1|494868|fgenesh2_kg.8__684__AT5G48160.2 |
| Sequence |
CTTGTCCTCA CATTTTGTCT TTTCTCACTC TCTCTCCCAT TGTTCTTCCT CGGCAACATC TCCCGACGTC TCTCTCCTCT GCTCCGATCT GTATCTCTTC TCTCTCAGTT TTTTGTTCTC TGAGGTGTTG GGTTAAATAT TGATGGGCAC ATCGTCTGGT TCCAATCATC CTCACCAGAT GTTACCACCA CGTCAACAAC AACGAAATGG AGGTCTCGAA ACAGCTCTTT CACTCGTATC TTCGGATCAG GAGCCACGTC GCGAGTCTCC AGCCGAGAGT GCGAGTTCTC AAGAAACATG GCCACTCGGA GACACTGTTG CGGGGAAGAA GACAGTGAGT CAAAAGACGG AGCCTGATTC TACGGAACAA AATGTGAATG TTATGCACCA TGTGTCGAAT GCGGATAAGG TATCGGTACG GGATATAGCT AGGGAAAGAG TTGAGTTGGT TGCGGAGAGA ATGCATCGAT TGCCGGATGA GTTTCTTGAT GAGTTAAAGA ACGGTCTTAA GTCTATACTT GAGGGGAATG TAGCGCAGAG TGTGGATGAG TTCATGTTCT TGCAGAAGCT TGTTCAGAGT AGATCTGATT TGAGCTCTAC AACACTTGTT AGAGCTCATC GGGTGCAGCT TGAGATACTT GTAGCGATAA ATACCGGGAT TCAGGCGTTC TTGCATCCGA ACATCAGTCT GTCTCAGCCG TCTCTTATCG AGATTTTTGT ATACAAGAGA TGTAGAAACA TAGCCTGTCA AAACCAACTA CCGGCTGATG ATTGCTACTG CGAAATATGC ACTAACAGGA AAGGGTTCTG CAACCTTTGT ATGTGTACGA TCTGTAACAA GTTTGATTTT TCTGTCAATA CTTGCCGCTG GATCGGATGC GACTTGTGTT CCCACTGGAC TCATACAGAT TGTGCTATTC GGGATGGACA GATCACCACG GGATCCTCTG CTAAGAATAC ATCAGGTCCA GGAGAAATAG TGTTCAAGTG CCGGGCTTGT AATCGGACGT CTGAGCTGCT GGGATGGGTT AAAGATGTGT TTCAGCACTG TGCACCAAAC TGGGATCGGG AATCTTTGAT GAAGGAACTC GACTTTGTTA GTAGGATTTT CCGCGGAAGC GAAGATCAAC GAGGTAGGAA ACTGTTTTGG AAGTGTGAGG AGCTTATCGA CAAGATTAAA GGTGGTTTGG CTGAAGCAAC TGCTGCCAAA TTGATATTAA TGTTTTTCCA AGAGATCGAA TTAGACTCCG CGAAGAGCTT TGAAAATGGA GAAGGCGGAC GTTTGATGGC ACCTCAGGAT GCATGCAACC GAATTGCTGA AGTTGTACAG GAAACTCTGA GGAAAATGGA GATAGTGGCT GAGGAGAAGA TGAGGATGTT CAAGAAGGCA CGCATGGCTC TCGAGACTTG TGATAGAGAG CTCGAAGACA AAGCCAAGGA AGTAGCAGAA CTGAAAGCGG AGAGGCAGAA GAAGAAACTT CAGATAGACG AGTTAGAGAG AATTGTGAGG CTGAAGCAAG CAGAGGCAGA CATGTTCCAG CTTAAAGCAA ACGAAGCAAA GCGGGAGGCT GATAGATTGC AGAGGATTGT ACTAGCGAAA ATGGATAAGT CTGAGGAGGA ATACGCAAGT AACTATCTGA AACAGAGGCT GAGCGAGGCC GAGGCAGAGA AGCAGTATCT GTTTGAGAAG ATTAAGCTGC AGGAAAATTC GAGGGTGGCA TCACAGAGCA GTGGCGGTGG AGGTGACCCG TCACAGGTGA TGATGTACTC AAAGATCCGC GATCTGCTTC AAGGATACAA TCTCTCTCCC AAGGTAGATC CTCAATCAAA CGAGCGTAAT CCTTTCAGAT CCAATCCTTG ATGCTCGTTC CTCCCTTATA AATATGTAGT TTTCATATCC TAAAACTCAT CACTTTGTTT TGTAAAACAA GTGTTTGTAG CCGTGTAGGA TCTATCTATA |
| Length | 1960 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 10746192.. 10748630 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G48160.1 |
| Description | Protein of unknown function (DUF1423) |
| TAIR curator summary | Encodes a nuclear PHD finger protein that is functionally redundant with OBE1 and plays an important role in the maintenance and/or establishment of the root and shoot apical meristems. |
| Alias | [OBE2][OBERON2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg486240 | Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein |
| 6 |
Ahg482154 | phosphorylcholine cytidylyltransferase |
| 6.48074 |
Ahg472928 | histidine kinase 3 |
| 6.48074 |
Ahg474651 | ubiquitin-protein ligase 1 |
| 8.83176 |
Ahg312525 | methyl-CPG-binding domain 10 |
| 10.7238 |
Ahg494501 | copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1) |
| 13.4164 |
Ahg486249 | |
| 16.4317 |
Ahg487099 | NRAMP metal ion transporter family protein |
| 17.4356 |
Ahg477583 | LUC7 related protein |
| 17.5499 |
Ahg496800 | indole-3-acetic acid inducible 9 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|