| Annotation |
|---|
| Description | jgi|Araly1|313049|fgenesh1_pm.C_scaffold_1001829 |
| Sequence |
ATGGATTCTT CTCATTACAA TCCTACCTAC GATCCATGGA ATTCTCCTTA CTCTCCTCAT CTTCATCCTC CTTCTGCTCC TCTCCTTCCG CCGCCACCGC CGTTACCTCC TCCTCCTCCT CGTCAATCTC ATCCCGAGAG CCCTAATTTA TATGGTCGAT CAACCCAGAG CAATGGTCAA CGTCAAGATT ACCACCATCA ATACTCTCAT CATCGCCAAG ATCTTCCGCC TAATCCGGCG GTTAATCAGC CTTCTTCAAA CTACTACCAG CATCATCCGT CACCGCTCCA GCAACAGCAT CAGCCACCAC CGTTGCAGCA GCAGCAGCAT CCTCAATACA TTCCTCAGCA AGTTAGTTAC GAGCCTCAAA GAATATCGCA GCCGTTGTCA TCGAGTATTC AATGTAAAGA ATCCAGAGTT ATAGCTCAAT CTGATTGGGT TGGGTTCAAT GAAAAGCGAC TTGATTCATG GACAGGGGAT GCTGCTCCGG GTCGACTTGA TTCTGGTCCA AGCCGTAACT ATCAGTATGA CTACAGCCGT AACTTGTCGA GGGAGTCTTC GGGTGTTAAT CGTGGTTTAG ATGGTAGTTC TAGGTCTAGA GATGAGTTTC GTAATCTTGG ATATGCTAGA AAAGAATCTG GAGCCACTAG GACAGAGGGG AATTATCAAG CCCGTGGTCA GTTAAAATCA GAATCCGATA GATTTGTTAG GGGTTTAGAT GAGGGAAATA GGGTTTTATC TTCTAGTGTT GGTTATGGCA GTGACAGATA TGGTCTTACA GTAAGTCGAG ATGTGACTAG GTCATCAGCA AGCCGTGAAG GGGCTAGAAA CCAGAGGTGG GATGAAGCAC GTAATGAAGG GAGGACTCTC CATCCCCAGA AAAAAGATGA TTACTATCAT TCTGAGATTG AACAATATTT TGATCGTGGA AGGAGAGAGG AGATCAGTCA GTTGAATCGA ACACCTAGGA AACAAATCCA GAAGAAGAGT GCTCTGCTAA GGCTTGAAAC TCCAAGATCC TATCAAAACA GTAGAGAGAA TGATTGGTCT CGGCAACATA ATCATCACAA TGGGAAAAGG TTATACTCTA ACTCATACAG GGGTAAGGAA CACTTGGGTC ATTCTGATCG TGGACTGGTG GAGAAGCAAA GGGGGAGAAG TCCAGTGGAT CTTGATATAT CATTTAAATC GAATGCTCTG GTAGCTAAGC CCGTAGCATC ACCTACAAGT GCAGGTATCC GTTCGGGCGC GTCTGTGACA CCTAGGTCTA TTAAAGCTAG AAGAGCATTG CTTTCTGATA AAAATGAGAA AGCTTCAGTA ACTGAAAGAA ATGGAAAGCT GGGAACCCAG TTGTCATTTG AGGAGGTTTC GGTTTCTGAG GGCTTCAGAC GGTCTACAAG GCAAACTACT GCATCTGAAA AACAACCTGA CAGTCACTCA ACCCCGTCTT CCAGTGATTC CGGTGGCAAG CTAAACAAGG TCAGATTTGT TCAGGACAGC AAAGTCAAAC TTACTGATAC AGGTCCTGAA GCTTCAACTC ATGATGCTGA AGCAAAAATT CGTAGTCCTG TACATGCTGC AGAAAAGATC TCTAGTTTTT GTGAGACTTT GAAAGAGGCC AAGGATGACA TTAATGTCAA ACATGGTAGC AATATGGAGG CTTGCTCCAC TGAGGAAGGT GTTATTGATG GAAACCAAAG TACACTGAAG TCTCATGAAG ATGTGTTGGA CAGAACGAGC ACTGATTGTA ATGCGGGCGA AGCGCTTATG CCGAAGGTCA TGGAGATGGA TGAAATCGTG AAGACAAAGG CAAAAATCAA TATATCTCCT GGTAAATTAC CTGTATCATG GCCAACAGCC GATGATCTTT CTGGGTGTTC TGAGGACATG GATTGTGAAG ATGACGACAT GGATTGTATA CCATCAAGGA ATATACCAAT GATGGAAGTA AGTACTGGGT TTGAAGAAAG AAAATTCATT AATTCATCTG ATGGATCTTT GGGTTACGGA GGAAAGGATT TTCAGAAGTT ATGTCTAGAT GCATCCATCT ATTTTAATAG AGAAGACCCT GGTGATAAGG TGTTGGCGAA GTCAGATATC GGTGGTATTG AAGATGACAA CAAGAGGATT AATAAGAATC TAGATTCCTT GTCTCCTGAA AATGCCTCTC TGGACATTGC TAATGTTTCA TCGGATCTTG CTAATGCAAA TAATAGTGCC TCAGGGGATC TTGCTAATGC TAACAGTTTT ACCGTTGGGA CATATATTAA TACTATGGTC ACGTCACCTG GTAAGAGTGT AGTTTTCCAG ATGGAAAGTA AAAATCTTCC TCACTGCAAA AACACAGTCA ATGCAGCTGT TGAGAATGTT AGCGGAAAAG AATACATGGA AACTACGCCT CTTAATGTTG CTGCAGAAAT GGCTGACAAT ATGGATAGTG ATGAAGGTAA ACAGACTTTT GTAAACGACA CTTCTTCATC TCTAACAAAG GTTGGAGTAA AGGGATCATC AAATGTGCTG TCTGTGGAGA GGACTGATGG CTGTTCGCAC AGTGATGAAT CTGATTTAGC TATGGCAGTA CCATCTGAGG TGTGTATGGA AAATGTAAGC GCCGAGAGAC TTGTCCCTGA TGAGGTTTTG AAATCTTATC ATCCTGCAGA AATTCCTTCT GTAGATCAGT TTAGTGGTTC TGATCGTAGA GGTTTGAAAG CTTATTTATT GGAGCCAAAT GTTTCTCTTA GCAAAGATCT TACTGATTGT GCGAGAGAGA GTCTTGTTGA GCGAGATGTT AGCCAAAGAT CTGCCACATT TTGTGATAAA TTACCTAGCT TGTCTGCGCT CGTAACTGAA ACAAATCTTG CAATTGGAAT TAATGGCATG TCTGGTAATG AAACGGTTAC TGATACTGTA TCTGGTCTCC ACGAAATTCA ACCATGTAAA ACAGTATGCA AGTTGTCTCC TGAAGATCGT TTTGGATATG GATCATCTGG TGTCATTGGT TCTGTCCGGA GTCTCTTTAT AGATAAAAAT CTTGAAAAGG ATCCTTCAAA GGTCAGTTCT TGCTTAGTAT CTGATAGTTC TGTTGGTCCT TGTCATATTT CTCCCTTGGT GGCAGTGAAT GAGGAGATAC AAAACAAAAT ATGTATCCAA GCTAACTGCA GTAATTCTCA AGATGGCATC AAGCATACGG AAAATAATTG TACTGAAAGC GTTGAGGTAG ATACTCAAGA AGAGAAAGCA AAGCTTCCTG GAGGAACTTC TAAGTCAAGA ACTCGGGGAA CTAATATTAT TGCTGGTAGT GGGGACTCTG TGTTATTATG TGATTCTTTA TCCAGCTCAG GAAGGCGGAA CTTCAGGCAG CTACGGAGTG AAGTTCATGT TGCTGCTATG GTTGATGAAA CTAGCAAAGG TGAAGAGAAA TCCAAGCCTT CTGGTGGTAT TGTTGCTGTT AGGAAAGATT CAGTGTTTCC ATGTGATTCT CTATCCAGCT CGCCAAGGCT GTACAGACCG TTACGGAGTG AAATTCACGT TGCTTCTATG GTTGATGAAA CTAGCAAATC TAAAGAGAAA ACAGAGTCTT CTGGTGGAAC TTCTAAGCAC AGAACTCCGG AAACTGATAT TGTTGCTGGT AGTGGGGATT CAGTGTTTCC ATGTAATTCT TTATCAAGCT CACCAAGGCT GAGCTTCAGG CAGTTACGGA GTGAAATTCA TGTTGCTGCT ATGGTTGATG AAACCAACAG AGTTAAAGTG AGTCAAAATG GAGATAGTCT TTTAGATACT TTACAAGAGC AAATTATGAG CTCCCATGAG TTAACCCAGC CAGATAGCTC TTTGGCGCAT TGTGATTTAG TTATGAAGCC AATTGGTGAT CCAATCGTGA AACTGACTGA TATAACTTCT GATGTGGGCT CTCAAGAAAA AGACTTACGC AATAGTGCTA AGACTGATAT ATTTGATGGC GAAGCATTGT CATCTGATGG AAAAGTTTCT GGAACTGAAA TTCCTGGTGA TTCAGGTGTT CTTGTGTCCA GATCATACTC ACATGCAGAT GTTAAATTTG CATCGACCCA TGTTAAAGAA CATGTAGTCT CTGTGCCACA CCGGGATCTT CAAAGTAAGA CATCTATGAA TTCTAAGTAT GAAATAGAAA AGAGGAAAAA GAAACCCAGT TACTCTACTC AGAAAAATTA TCCCAGTTCC CTGCTTTTTG TGTCTGACAC GAAGAAAGAT GCTAACCCTC CAATTCATAT CACAAAGCGT CACACTTGGC ATCGAAAGTC CGATACTTCT CCCTCTTCTT TTGTAGCTGC CAAGCCTTTG TCTTCGACGT TGTCTACACA ACAGAAGTTT CCCAAAGTGA CTGCCCAATC TAGTAATAGT TACGTACGTA AAGGGAATAG TCTTCTTCGA AAACCCTCAC ATTCTCCTGG TACTGCCCTG GGAATGCCTC CATCTGCTAT CCAGTTGAAC CATTTCACTG TGGAAGACAA AAGCACGGGA CCTTCCAATA TGGTTGATGT AGATAATGCT TCTTCACTTG TTAAAACAGG GGAAATACCT ACTCTTGAGA GGCAGTCAAA GCCTCCCTCA GACAGCAGCA CTTCCAAAGT ATCAAATGCC ATCGCTACTT CTTCAGGAAA ATGTGTGTTA TCTTACAGCA CGGATCATCT CACCCCCGGT TTACCTGAGT CTATCATGGA TTCTGCTACA TCTGGAGAAG CTAATTTTCC ACATTCTGGT GGGGATACAT TGAAGACATT TGATACACTA ATTCAGACGG GTTACGCTTC AGATTGCCAG CAGAAGAGAA ATCCGTCTGA CTTGGATTCT GCGAATTTGA AGAGAATGGT ATATGTCAAG AGAAAGGCAA ATCAGATGGT TGCAGCTTCA GATATTCATG GTGTAAGTCA GAACCAGATT CCTTCCTCTG ATGGGTACTT TAAGCGAAGT AAAAATCAGC TAGTAAGGAA TTCAGAGAGC CGTTGCAATC AGTCAATTTC CTTACCTGAT GATGCATTAG ATACACGATC AGCTGCAAAC ATAGTTTCGG AAAGATCATC TAGCTCAGCA TTCTCTGACT CTGCTGTCAT GCGACCATTT AAGCAATCAA AGTTTTCTCT GGTATGGACG CAAAATGATC CGCAGCCAAG AATGCCCATA GCTCACATGC GATATCAGAA TATTTTGCCG CAACTTGTTC CCTGGAAAAG AGTGACATAC TGGAGAAGAT TAATGAATTC AGTGTCTGCT TTCCGAAATG GTTCTTTTCC CAACATTAGG AGGCCACATT GGCTGTGGCT GCATTCTCAA AGAAAGAAAG TGAAAAGCAT TCTGGACAAA ATAATAATAG TATGGCGAGC AGAAACCATC TGGCACGGGA GCGCGTTTTC AGGTTTGGTT CCCTTCGTTA TAAAATGGAC TCTTCAAGAC GAACTCTTCA GAGAATATCT GTCTTACCCT TATGTATATC TGGTGAGCTT AAACATAAAC GTTTTGTTAG ATGTTGATCC ACCGTGCTCT GGACCTTCTG AAAATGGGAA GGGTGTGAAA ATACCGATTA TCCCAAAGAG ATTGGTGATC GGCAATGAAG AATATGTTCG GTTCGGAAAT GGTAACCAGC TTGTCAGAGA TCCAAAGAAA CGAACTCGTG TGTTGGCAAA TGAGAAAGTG AGATGGAGCC TGCACAATGT CCGGTTGCGG TTGGCTAAAA AGAAGAAGTA CTGCCAGTTT TTCACAAGAT TTGGGAAATG CAACAAAGAT GACGGAAAAT GTCCCTATGT TCATGACCCC TCGAAAATTG CTGTTTGCAC CAAATTTTTG AATGGATTGT GTGCCAATGC AAATTGCAAA TTGACTCACA AGGTCATTCC AGAAAGGATG CCTGATTGTT CTTATTATCT GCAAGGCCTA TGCAACAATG AGGCATGTCC ATATAGGCAT GTGCATGTCA ATCCGAGCGC CCCTATATGT GATGGGTTTT TAAAGGGATA CTGTTCCGAC GGAGACGAGT GTCGGAAGAA GCATTCCTAC AACTGCCCGG TTTTCGAAGC CACTGGATCA TGCTCTCAAG GATCAAAATG CAAGCTCCAC CACCCCAAGA ACCAAAGCAA AGGAAGAAAG AGAAAAAGAC CAAGCGAACC ATCACAGAAA AATGCCCGTG GGCGTTACTT TAGTTCACTT CACAACATCC TTTCCGAGTC TGAGCCAATG GTATTCAATA GGCGTTCTAC TGACAGTGAA GTTTTTGGAA TGGAAGGCCT CGATTTTATA ACCCTTGGCA CTACTGAGTA TGAAGCCAGT GATGACAATG ATCCAGCCAC CGTGCAATCT ATCTCCAGTG ACAGCGAATC ACCGATTTCA ATATACAATC TAATCACACC AGTAGCTCTA ATGCAGTAA |
| Length | 6399 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 8890626.. 8898570 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G21580.1 |
| Description | Zinc finger C-x8-C-x5-C-x3-H type family protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.48528 |
Ahg482806 | chaperone protein dnaJ-related |
| 10 |
Ahg470941 | Presenilin-1 |
| 11.4018 |
Ahg478006 | multifunctional protein 2 |
| 17.6635 |
Ahg493633 | histidine kinase 2 |
| 18.1659 |
Ahg491768 | autoinhibited Ca(2+)-ATPase 10 |
| 20 |
Ahg940406 | conserved peptide upstream open reading frame 41 |
| 22.5167 |
Ahg471910 | cationic amino acid transporter 8 |
| 22.9783 |
Ahg480948 | Arabidopsis phospholipase-like protein (PEARLI 4) family |
| 24.5357 |
Ahg481680 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 25.807 |
Ahg474980 | Protein kinase superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|