| Annotation |
|---|
| Description | jgi|Araly1|940406|scaffold_600950.1 |
| Sequence |
TTGGCTTAAA CTGCAAGAGC ATGCCTCTTG ATACCAGGCA GCAGAAATGG TTGCCATTGG GCTTAAATCC TCAAGCTTGT GTCCAGGAAA AGGCGACTGA GTCTTTCCGT CCTGGAATTC CTTTTCCGGA ACTCGGTAAA GTATATGCAG CTGAGCATCA GTTTCGCTAT TTGCAGCCAC CGTTCCCAGC CTTATTGTCT AGATATGATC AGCAGTCTTG TGGAAAACAA GTTTCATGTT TGAACGGGCG ATCTAGCTGC GGTGCTGCTC CAGAGGGGGG ACTCAAGTCT TCTCGGAAAA GATTTCTAGT ATTCGATCAG TCAGGAGATC AGACTCGTTT GTTACAATGT GGATTTCCTC TGTGGTTTCC TTCTTCTATG GATGCAGAGC GAGGGAACAT TCTCGGTTCC CTACACCCAG AGAAAGGGTT TAGTAAAGAT CATGCCATTC AAGAAAAGAT ATTGCAACAT GAAGATCATG TTAATGGCGA CGAAGAGTCA GACATGCACG AAGACACCGA GGAAATCAAC GCGCTGCTGT ATTCTGATGA TGACGATAAT GATGATTGGG AAAGTGATGA TGAAGTAATG AGCACTGGTC ACTCTCCATT CCCAGTTGAA CAACAAGCGT GCAACAAAAC AACAGAAGAA CTGGATGAAA CTGAAAGCAG TGTTGATGGT CCACATCTTA AAAGACAGAA ACTACTGGAC CATTCATACA GAGACTCATC ACTATCCCTT GTGGGCACCA AAGTCAAAGG CTTATCAGAT GAAAACCTTC CTGAATCCAA CATCTCAAGC AAACAAGAAA CAGGTTCTGG TCTGAGCGAC GAGCAGTCAA GCAAAGACAA GATTCACACC GCTCTGAGAA TCCTCGAGAG TGTAGTTCCG GGGGCAAAGG GAAAAGAAGC TCTTTTACTA CTAGACGAAG CCATTGATTA CCTCCAGTTG CTGAAGCAAA ACTTAAGCTC ATCAAAGGGT TTAAACAACC ATTGGTGAAA AACCTAAAAC CCCTTTTTGC TATATTGATA AGGCATGTTT GGTTGGTTAA AGAGAAGACA AGGGACAAAA GATAATCAAT GAGGTAAAGG ACTGATGAAG AAGATTCTCT CAAATTCATT AACGTGGGTT TGAAACAATT TGAACACGCC TGGTGACCCT AGTGGGACCT TATCCACTGT TCATCTAGCT GGATCA |
| Length | 1196 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 3617143.. 3618338 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G09463.1 |
| Description | conserved peptide upstream open reading frame 41 |
| TAIR curator summary | Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF41 represents a conserved upstream opening reading frame relative to major ORF AT5G09460.1 |
| Alias | [CPuORF41][conserved peptide upstream open reading frame 41] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg487534 | sorting nexin 2B |
| 2.44949 |
Ahg496450 | Major facilitator superfamily protein |
| 6.9282 |
Ahg909539 | |
| 7.34847 |
Ahg480236 | SH3 domain-containing protein |
| 9.38083 |
Ahg944613 | myosin, putative |
| 9.79796 |
Ahg471988 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 17.8885 |
Ahg476156 | equilibrative nucleotide transporter 1 |
| 20 |
Ahg313049 | Zinc finger C-x8-C-x5-C-x3-H type family protein |
| 20.4939 |
Ahg947666 | |
| 21.6333 |
Ahg332145 | Phosphatidate cytidylyltransferase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|