Detail



ID : Ahg313260

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|313260|fgenesh1_pm.C_scaffold_1002040
Sequence
ATGGCTGCCA TGTTGATGCA GCCATGGCCA CCGTTTCTTC CTCATCTAAC CCTAATTTTC TTATCCCTAA TCCTCTTTTT CCCTAATCAA TCATTTTCTC AATCCGATTC TCCTCGAAAC ATCGAAACAT TTTTCCCAAA TGACACAATC ACCGCTCCAG TTCCACCTCC GGTTCTATCA CCGCCGGAAA ACCCACCATC TTCTTCATCG GACAGAGGAA AGATCTTGAG GGCTGTGCTT ATAACAGCAG CAAGCACTTT ACTTGTAGCA GCCGTGTTCT TCTTCCTCGT CCATAAGTGG CGGCGAAGGA GAAACAGAGT CGGCGGTTTT GAGAACACCC TCCCACCACC GGTTCCTCCG TTAGCGGAAG CGGCTTTAGC TCGCGAAGGG TTCACTAGAT TCGGCGGAAA CGTAAAGGGT TTGATCCTTG ATGAGAATGG TCTCGATGTG TTGTATTGGA GAAAGTTACA GAGTCAGAGA GACAATAAAA GTGGAAGCTT TAAGAAAGAG ATCGTTCACG GAGACGACGA AGAGAAGAAT GTGATTTACT CAAAGAATAA GAAGAAATCT GGACCGGTGA CGGAGACTCC TCTTCTCAGA GGAAGATCAT CGACTTCTCA TAGTGTAATT CACAACGATA ATGACCGAAA TGCCACCACC ACCACCACTC ATCCTCCTCA TGTCAAGACT GATTCTTTTG AATTCGTCAA ATCAGATCCG TCTCCGCCAC CGCCACCTCC ACCGCCAATT CCGGTGAAGC AGAGTGCAAC ACCTCCTCCT CCTCCTCCTC CTAAGCCTAA GAATGGTCCA TCTCCGCCGC CACCTCCACC GTTGAAAAAG ACAGCGGCTT TGTCATCATC GGTTTCGAAA AAACCACCGC CGGCTCCTAG AGGATCATCT TCAGGGGAAG GTTCAAATGG TCAGGTAAAG CTTAAGCCTT TACATTGGGA TAAAGTCAAT CCTGATTCTG ATCATTCCAT GGTTTGGGAT AAAATCGATC GTGGCTCATT CAGTTTCGAT GGCGATCTAA TGGAGGCTCT CTTCGGCTAC GTGGCGGTCG GAAAGAAATC TCCAGACGAC GGCGGTGATA AAAAGCCTAG CTCAGCTTCA CCGACCCAGA CTTTTATACT TGACCCGAGA AAGTCTCAGA ACACAGCAAT TGTGCTCAAA TCCTTAGGAA TGACTCGTGA CGAGCTTGTG GAATCGTTAA TGGAAGGTCA CGATTTTCAT CCAGATACAC TAGAGAGGCT CTCTAGAATA GCTCCAACGA AAGAAGAACA ATCAGCGATT CTCCAATTCG ACGGTGACAC GAAAATGCTC GCAGACGCTG AATCGTTCTT GTTTCATCTT CTAAAGGCAG TGCCTTGTGC GTTCACTCGT CTTAACGCGT TACTCTTTAG AGCTAATTAC TATCCAGAGA TCTCAAACCA TAACAAATCT CTCCAGACGT TGGACTTGGC TTGTACAGAG CTTAGATCAC GTGGCTTGTT CGTGAAGCTA TTGGAAGCGA TTCTGAAATC TGGAAACAGA ATGAATGCAG GAACAACTAG AGGAGATGCT CAAGCTTTTA ATCTCACCGC GCTTTTGAAG CTTTCCGATG TGAAGAGTGT TGATGGGAAG ACGACTTTGC TTAACTTTGT GGTGGAAGAA GTGGTTAGAT CAGAGGGGAA GCGATGCGTG CTTAACCGAA GGACTAACCG TAGCTTTAGC CGTAGCAGTA GCAGTACGAT CTCCGAGGTT ATATCGAAGG AAGAACAAGA GAAGGAGTAT CTTAGACTCG GTTTACCTGT TGTTGGAGGG TTAAGTTCTG AGTTCACCAA TGTTAAGAAA GCTGCAGCTA TAGACTATGA CACAGTTGCT GCAACGTGCT TGGCTCTTGC GGCTAGAGCG AAAGACGCTA GACGAGTGTT GGCGCAGAGC GAAGGAGATA ACAAAGAAGG AGAGAGGTTT GTGAAGAAGA TGAATGAGTT TCTTGATTCG GTTGAGGAAG AAGTGAAGTT AGCGAAACAA GAAGAGAAGA AAGTGTTGGA GCTTGTGAAG AGAACAACAG AGTATTACCA AGCAGGAGCT GTGAAAGGAA AGAATCCACT TCATTTGTTT GTTATTGTTA GAGATTTTCT TGCAATGGTG GATAAAGTTT GCGTAGAGAT CGCAAGGAAT TTGCAGAGGA GGGCATCGAT GGGGAGTCCT CAGCAGAGGA ATGCAGTGAA GTTTCCGGTT TTGCCTCCGA ATTTCATGTC GGATAGATCA AGAAGTGATT CTCGTGGATC AGATTCCGAT ATGTGA 
Length2286
Protein Sequence
Protein Residue
Map Locationscaffold_1: 10188300.. 10190699
Download Sequence
A.thaliana
AGI-codeAT1G24150.1
Descriptionformin homologue 4
TAIR curator summaryEncodes a group I formin. Localized to cell junctions. Polymerizes actin. Binds profilin.
Alias[ATFH4][FH4][FORMIN HOMOLOGUE 4][formin homologue 4]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg493466 XB3 ortholog 4 in Arabidopsis thaliana
6.9282 Ahg933857 protein kinase family protein
9.16515 Ahg331636 Copper transport protein family
12.3288 Ahg496241 receptor-like protein kinase 1
12.9615 Ahg489094 NAC domain containing protein 90
12.9615 Ahg476856 Target of Myb protein 1
17.3205 Ahg943489 Concanavalin A-like lectin protein kinase family protein
18.0278 Ahg491260 UDP-glucosyltransferase 73B2
23.1517 Ahg939077 Phosphoglycerate mutase family protein
23.9165 Ahg350245 RING/U-box superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression