| Annotation |
|---|
| Description | jgi|Araly1|314163|fgenesh1_pm.C_scaffold_1002943 |
| Sequence |
ATGCTATCGG AGATAGCGAA AGACACGGTG GCTACGGCGG AGAAATCACC GCTTGAGCTA CTTCAAGAAA CCAAAGCCTC CGTCGAAGCA ATCATCGCAA AGCTCCTCTC AATAAAGCAA CAAGGAAACC CCAAATCTGA GAATCGAGAA CTCCTCACTC AGATGTTCCT CAACTTCATC AATCTCCGTC AAGCAAATCG CGCGATTCTT ATAGAAGAGG AGAAAACGAA AACTGAGACG GAATTAGCAA AATCTCCGGT GGATTTTACG ACATTGGAGC TTCACAATCT CATGTATGAG AAGAGTCATT ACCTCAAAGC TAATAAAGCT AGTAGAGATT TCAAATCTAA GTATCCAAAC ATCGATCTCA TATCTGAACA AGACTTCTTC AGTGATGCTC CTGAAGCTAT CAAATCTCAA ACGTTATCAA ATGATAGTTC TCATGATTTG ATGCTTAAAA GACTCAACTT TGAGCTTCAT CAGAGGAAAG AACTATGCAA GCTTAGAGTG AGGTTGGAGC AACAGAAGAA GTGTTTGCTT GAAACGAATG CGGAGCGGAA TAAGTTTCTG TCGAGTCTTC CGGTGCATCT CAAATCTCTA AAGAAAGCAT CTTTGCCAGT ACAGAGCCAG TTGAGTTTGC AGAATCAGAA GAAGCTCAAG TATCATAATC TAGCTGAGCT TCTTCCTCCG CCGCTTTATG TTATATATTC TCAGTTCATG GCACAAAAGG AAGCTTTTGA AGAGAACATC GATGTCGAGG TATCTGGGAG TCTTAATGAT GCTCAAAGTT ATGCGCGGCA GCAAGCAGAA CAGAACTCAG AGAATCTAAG AATGGAGATT GATGATGAAG ATAATGATGG AAAAAGGCAA AGGAAGCGAC CCAAGAAAGA AGGGTTTGAT GAGGGAGGAC TATATGAAGT TCATCCTCTT AATGTTGTCC TTCATGTTTA TGATGATGAG GTTCCAGATC CGAAGTCTCA TGATCTTATC ATGCTCAAGT TTGAGTACTT GTTGAAGTTG AATGTTGTTT GTGTTGGCAT TGAAGAGTCA CAAGATGGAC TTGAGAAAAA TATACTCTGT AACATATTTC CAGATGATTC TGGACTTGAG CCTCCCCATC AGTCAGCCAA GCTCATTCTG GGCAATGATC ATGCATTTGA TGAGAGCAGA ACTTCGAGGC CATACAAGTG GGCACAACAT TTGGCGGGGA TTGAGATTTT ACCTGAAATG TCACCATTTT TTACTGACAA GGATATTCAA AATAGTGATA CAGCTAAAGA CTATGCTTCT GCATCTGATC ACCGCAATGT GCAAACCGTC CTGCAAAGAA TACGGTCCCA GAAAAAGACT AAGGTAAAGC TAACTCTTGA GTGA |
| Length | 1374 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 22247972.. 22249675 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G45233.2 |
| Description | THO complex, subunit 5 |
| TAIR curator summary | Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis. |
| Alias | [AtTHO5][THO5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 23.8747 |
Ahg495812 | DNA ligase IV |
| 29.4449 |
Ahg927133 | transcription coactivators |
| 41.1339 |
Ahg311256 | 5'-3' exonuclease family protein |
| 45.9783 |
Ahg495407 | Galactosyltransferase family protein |
| 47.244 |
Ahg474658 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 53.2353 |
Ahg478367 | FAD-dependent oxidoreductase family protein |
| 59.5315 |
Ahg922941 | AAA-type ATPase family protein |
| 75.8485 |
Ahg929017 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| 78.9557 |
Ahg940494 | asparagine synthetase 3 |
| 80.5295 |
Ahg342721 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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