| Annotation |
|---|
| Description | jgi|Araly1|314229|fgenesh1_pm.C_scaffold_1003009 |
| Sequence |
ATGGCCGCGA CATCAAACTC AGGCGAAGAT CCGACTCTTT CTTATCACCA CCACCGATCT CCTTTTCGCT TCGAATTACT TCAATCTATC TCTTCCTCTG ATCCTCGTTA CGCTTCTCTA ACTCCTTCTT CAACGAATCG ACCTTTCTCA GTCTCTCAAT CGCTTCCGAA TTCTCAACAG TCTCCTCTAA TTTCATCTCA CTGGGACGAT TCTTACTCTC AAATCACTCA GAAAGTTCAA AAGAGTAGAA AGAATCATCG AATTCAGCTG GGATCTATTG CAAACATGGC TGGAGAAAGC ATAGATATAG CTAAAGTAAT AGTGAAACAA GAGTCGTCTC CTCAAGATAT TAAACGTGTA TACAACAAGT CAAAGGGTAC TAAACAGTTA AAGGCCGGGA AACGAATGGC GAATGGCGAA GCACAAAATG GTGGCTTAAA TGGAACTAGT ATTAACTGCC GTTATGATAG TTCTTTAGGG TTATTGACAA AGAAATTCGT CAAGTTGATC CAGGAAGCTG AGGATGGAAC ACTTGATCTT AACTATTGTG CAGATGTTTT GGAGGTACAA AAAAGAAGGA TATATGATAT TACAAATGTC CTTGAAGGAA TTGGATTGAT AGAGAAAACT ACAAAGAACC ATATCCGCTG GAAGGGTGCT GAAAATCTTG GACAGAAGGA CCTGGGAGAT CAAATTGCAA GGCTTAAGTC AGAAGTAGAA AGTATGCAAT CTGAGGAAAG CAGGTTGGAT GATCTTATAA GGGAAAGACA AGAAGCTCTC AGATCCTTGG AGGAAGATGA ATATTGTAGA AGGTACATGT TTATGACGGA GGAAGATATA ACAAGTCTCC CACGGTTTCA GAACCAGACA TTACTAGCAA TTAAAGCTCC TACAGCTAGT TACATCGAAG TTCCAGATCC TGATGAGATG AGATTTCCGC AACGACAGTA CCGGATGGTG ATTAGGAGTA GGATGGGGCC GATTGATGTC TATCTTTTAA GGTACTTAGC TACGCATTCC ACTCTCTTGT TCATAACTGG GAATAAACAT GGTCGCAGCA AATACAAAGG AAACAGTGGG GAAACAAGTG ACAAGTTGGG TCATGAGTCT GATCAAAAAG CTCCATCTGG AGTGGACACT CCTTCCTTGA AAATAGTAAC TTCAGATACT GATTTAAAAG CAGATTACTG GTTTGAGTCA GATGCAGAGG TGAGCCTCAC AGATTTATGG AGCAACTTCA GCAGCTGA |
| Length | 1248 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 23110951.. 23113560 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G47870.1 |
| Description | winged-helix DNA-binding transcription factor family protein |
| TAIR curator summary | Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. AtE2Fc is regulated by a balance between gene expression and ubiquitin-proteasome proteolysis. AtE2Fc might play a role in cell division and during the transition from skotomorphogenesis to photomorphogenesis. E2Fc has been shown to interact with DPB in its nonphosphorylated form; when E2Fc is phosphorylated, the formation of the E2Fc/DPB heterodimer is lost. |
| Alias | [ATE2F2][ATE2FC][E2FC][ARABIDOPSIS THALIANA HOMOLOG OF E2F C] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.08276 |
Ahg496305 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 9.16515 |
Ahg496475 | |
| 10.198 |
Ahg325494 | translocon at the outer membrane of chloroplasts 64-V |
| 19.7484 |
Ahg496317 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein |
| 27.2397 |
Ahg328905 | Vacuolar iron transporter (VIT) family protein |
| 28.4605 |
Ahg341309 | Sterile alpha motif (SAM) domain-containing protein |
| 30.3315 |
Ahg484217 | mediator subunit 8 |
| 32.0312 |
Ahg483048 | ABC2 homolog 9 |
| 38.6782 |
Ahg474203 | |
| 47.1593 |
Ahg471107 | sucrose transporter 4 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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|
| Growth Chamber expression |
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