Detail



ID : Ahg316139

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|316139|fgenesh1_pm.C_scaffold_2001172
Sequence
ATGTCTCCAG TTGAACCCGC CGGGATAATG AAGAAAACCC ATCGTCAGAA ATCTCAGAGA TTATGGGCAA AGCTAGTAAT GAGAAAGTGG TTGAACATAA GTGGTAGAGA TCCTGAGTAT GGTGCTGATA CTGAAGATGA ATCCGAAAAC GAAGATGTTC GTGAAGACAA CGATGACTCT AGTTCCGATG AAGAAGAATC TTCTAGCTCA AGAGGAAGAG AATCAAAAGT TTGTGAGAAC GCGGAGGATG CAATCGCAGC CGCTTCCGCC GTTGTAGACG CAGCAGCAGC TGCGGCGGAG TTTATTAGCA ATGAAGCTCC AATGAAGTTA CGAAGAAGGA ATTCAGAAAC ATTAAGAGCA CAGTACATTA ACAACAAAGA AATAAGAGTT TGTGTTGGTA CGTGGAACGT TGGAGGAATC TCACCACCAT CTGATCTTGA CATCGATGAC TGGATTGAAA TTAATCAACC AGCTGATATC TACGTTCTTG GTTTACAAGA GATTGTTCCG TTAAATGCTG GAAACATTCT TGGAGCGGAA GATAATCGTC CGGTTGCGAA ATGGGAAGAA GTGATTAGAG AAGCATTGAA CAGAGTTAGA CCAAAACTCT CTGGGGTTAA GAGTTATAGT GATCCACCAT CTCCTGGTAG ATTTAAACCT TTTGAGGAAA CACATGATGT TATAGAGGAA GAAGTAGCTT TTGAGAGTGA TAGTGATGCT GGTGTTGAGG TTCATCCGAT TAACGAGGAA GAAGAAGAAG AAACCGATAG GCTCTGGGCG CTTAAACATG ACGGTGGAGT TATCGGTGAA GTTCACACTC TTGTTAACCC GAATACCGGT TTGCCGGTTG TTGAGATCAA GAGACAGTTT TCGATTCCTA AGAAGCTAGA CAGACAACTT TGTTTACGTG CTGATACTTT TGAGGGGAAT ATCGAAGAGG ATTCTAGTCA AACCGGTATG AAAACGATAA ACCGGATGTT AAGCGGGAAA GAACGGATCG GTTTGAGCTG GCCTGAGCCA CCATTGAACA TGTTAGGACC TTGCGTTCTC GATAGACAGC CGTCGATAAA GACAGTGAAG TCTTTAAAAA CAGCAAAGTC TTTCAAGGCT TTTAGTTCGT TTAAGTCTGT AGCCGGAAGC AACAACGGGA TTCCGCCGGA GGTATTGGCT CTAGCGGAAA TGGACTTGCA GTTGCTAATG GAGAGGAAAC GAAGACCGGC TTATGTGAGG CTTGTGAGTA AACAAATGGT TGGGATTCTT TTGACCATTT GGGTTAAACG AAGTCTGCGA AAACATATTC AAAACGTACG AGTGTCTACT GTTGGAGTTG GCGTCATGGG ATATATTGGT AACAAGGGAG CTGTATCTGT GAGCATGTCG ATAAACCAGA CGTTCTTTTG TTTCATAAAC ACGCATTTAA CGGCTGGAGA AAGAGAGGTT GATCAGATCA AGAGGAATGC TGATGTACAC GAGATACATA AAAGAACAGT CTTTCACTCT GTCTCAGCTC TTGGACTTCC CAAGCTTATC TATGATCACG AAAGAATAAT CTGGTTAGGA GATCTCAACT ATCGGCTTAA TTCATCGTAT GAGAAAACCA GAGACCTCAT TTCCAAGAGA GAATGGTCCA AGTTACTAGA ATATGACCAG CTGGTAAAGG AATACAGAAA AGGTAGAGCA TTTGACGGAT GGTCAGAAGG AACTCTACAT TTTCCACCAA CTTATAAGTA CCAAGCGAAT TCCGATGAGT ACACCGCAAA CGATGGAAAG GCCCCGAAAA GAACACCAGC TTGGTGTGAC AGAGTACTAT CCTACGGGAA AGGAATGAGG TTGGTTCATT ACAGGCGAAC CGAACAGAAA TTCTCAGATC ATCGTCCGGT CACAGCGATA TACATGGCTG AAGTCGAAGT GTTTTCTGCT AGGAAGCTTC AGCGAGCGTT GACATTCACG GATGCAGAGA TTGAAGACGA GGGACTTGTT GCCGTTCTCG TTTAA 
Length1995
Protein Sequence
Protein Residue
Map Locationscaffold_2: 14125935.. 14129144
Download Sequence
A.thaliana
AGI-codeAT1G71710.1
DescriptionDNAse I-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.89898 Ahg940598 Nucleotide-sugar transporter family protein
5.74456 Ahg480040 Sodium Bile acid symporter family
9.74679 Ahg917411 autoinhibited Ca2+ -ATPase, isoform 8
18 Ahg473372 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
19.2354 Ahg480528 membrane bound O-acyl transferase (MBOAT) family protein
20.445 Ahg317356 with no lysine (K) kinase 1
24.4949 Ahg926972 RAC-like GTP binding protein 5
25.3772 Ahg934997 transcription factor IIB
25.5147 Ahg931043
25.9808 Ahg486241 Tubulin binding cofactor C domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression