Detail



ID : Ahg934997

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|934997|scaffold_402985.1
Sequence
TTAGGGTTTT CTTTGAAATC ATGTCGGATG CGTATTGTAC GGATTGTAAA AAGGAGACGG AGTTGGTGGT CGATCACTCA GCCGGAGATA CCCTTTGCTC CGAGTGTGGT TTGGTTTTGG AATCTCACTC CATTGATGAG ACCTCTGAGT GGCGTACCTT CGCTAATGAA TCTTCCAACA GCGATCCCAA TCGTGTCGGT GGTCCAACCA ATCCGCTTCT CGCCGATAGT GCTCTCACCA CTGTTATCGC TAAGCCCAAT GGTTCCTCCG GTGATTTCCT GTCTTCTTCT CTCGGGAGGT GGCAGAATCG TAACTCCAAT TCCGATCGTG GTTTGATTCA AGCGTTTAAA ACCATTGCTA CCATGTCTGA AAGGTTGGGA CTTGTTGCGA CTATCAAGGA TCGGGCTAAT GAGATATATA AGAGGCTGGA GGATCAAAAG ACAACCAGGG GAAGAAATCA GGATGCACTC TATGCAGCCT GCCTGTACAT TGCCTGTCGC CAAGAGGACA AGCCACGAAC CATTAAGGAA ATATGCGTTA TTGCCAATGG TGCGACAAAG AAGGAAATTG GCCGAGCAAA AGACTACATT GTTAAGACAT TGGGACTGGA TCCTGGTCAG TCTGTGGAAC TAGGCACAAT ACACGCTGGT GATTTCATGA GAAGGTTCTG CTCCAACCTT GGAATGTCTA ACCATGCGGT TAAAGCTGCT CAGGAAGCTG TGCAAAAATC TGAGGAATTT GATATAAGGA GGAGTCCTAT ATCAATAGCA GCAGTAGTTA TCTACATCAT AACCCAGCTT TCTGATGACA AGAAGACTCT CAAAGATATA TCGACAGCGA CAGGAGTAGC AGAAGGGACA ATAAGAAATT CATACAAAGA CTTGTACCCA CATCTGGCAA AGATAGCACC AAGTTGGTAT GCTAAGGAAG AGGATCTTAA AAACCTGTCA AGTCCTTGAA GTTGTTTCTT GATTCTTCTA 
Length980
Protein Sequence
Protein Residue
Map Locationscaffold_4: 19254768.. 19256640
Download Sequence
A.thaliana
AGI-codeAT2G41630.1
Descriptiontranscription factor IIB
TAIR curator summaryEncodes the transcription factor TFIIB.
Alias[AtTFIIB1][TFIIB][TFIIB1][transcription factor IIB][transcription factor IIB 1]
Gene coexpression
MR
MR Locus Description
7.81025 Ahg917411 autoinhibited Ca2+ -ATPase, isoform 8
8.48528 Ahg929508 Tetratricopeptide repeat (TPR)-like superfamily protein
12.4499 Ahg480993 ATP binding microtubule motor family protein
16.4317 Ahg483346 cold regulated 15b
18.5742 Ahg943755 Transducin/WD40 repeat-like superfamily protein
21.9089 Ahg489219 Transmembrane CLPTM1 family protein
21.9317 Ahg470910 chloroplastic NIFS-like cysteine desulfurase
24.1247 Ahg489475 TCP-1/cpn60 chaperonin family protein
24.7992 Ahg932059 B-box zinc finger family protein
25.3772 Ahg316139 DNAse I-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression