Detail



ID : Ahg317456

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|317456|fgenesh1_pm.C_scaffold_3000472
Sequence
ATGACCGCAC CAGTTCTTGT TCTCAAGGAG TCATTGAAGC GTGAATCTGG AACAAAGATT CACCATGCTA ATATTCAGGC TTCCAAGTCT GTGTCTGATA TCCTACGCAC CACATTGGGT CCTAGCTCTA TGTTAAAGAT GCTTCTTGAT GCTGGTGGAG GGATTGTTGT TACTAATGAT GGAAATGCTA TTTTGCGTGA AATTGATGTT GCTCACCCTG CAGCTAAGTC GATGATTGAG TTGAGTCGCA CACAGGACGA AGAAGTCGGT GATGGGACTA CATCTGTTAT TCTGGTGAAC TGTTACATGT CGCTGAATCA TTTCTTGAGA AGAGTTACCA TCCCACAGTC ATTTGCCGAG CTTATAATAA GGCTCTCGAG GATGCCATGG CTGTTCTTGA ATAGATTGCC ATGCCAATCG ATGTCAATGA CCGCAAGTGC AACAGTACTA GGATTAGTCA AGAGCTGCAT AGCAACAAAA TTCACTAGCA AATTTGGAGA TCTTATTGCT GAATTGGCTA TTGATGCCAC CACTACTATT GGTGTTGATC TTGGACAAGG ATTGAGGGAG GTGGATATTA AAAAGTACAT TAAGGTTGAG AAGGTTCCTG GTGGGCAGTT GGAGGACTGC AAGGTTCTCA AAGGAGTCAT GTTTAACAAA GACGTAGTTG CTCCAGGTAA AATGAAGAGA AAGATTGTCA ACCCGCAGAT TATTCTTCTT GACTGCCCCC TGGAGTACAA GAAAGGTGAA AACCAAACCA ATGCCGAGTT GGTTAGAGAA GAGGACTGGG AAGTGCTGTT GAAATTGGAA GAGGAGTACA TCGAGAACAT CTGCGTGCAA ATACTAAAGT TCAAGCCCGA TTTAGTAATT ACAGAGAAGG GGCTTAGTGA CTTGGCCTGT CATTATTTCA GTAAAGCTGG GGTTAGTGCA ATCAGAAGGT TGAGAAAGAC GGACAACAAC AGAATTGCTA AGGCTTGTGG AGCTGTGATT GTCAATAGGC CTGATGAACT TCAAGAGTCT GATGTTGGTA CCAATGTTGG CTTGTTTGAG GTCAAGAAAA TAGGAGATGA TTTCTTTTCC TTTATTGTTG ATTGCAAAGA ACCCAAAGCA TGTACCGTAC TCTTAAGAGG ACCAAGTAAA GATCTCCTCA ACGAAGTGGA AAGAAATCTT CAGGATGCAA TGTCTGTTTC AAGAAACATC ATCAAGAACC CAAAGCTTGT TCCTGGCGGT GGAGCCACAG AACTAACAGT TTCTGCCACT TTAAAACAGA AAAGTGCAAC AATTGAAGGA GTCGAAAAGT GGCCTTATGA AGCAGCTGCT ATAGCTTTTG AGGTCATTCC ACGTACTCTA GCTCAGAACT GTGGAGTTAA CGTGATCAGA ACTATGACAG CATTGCAAGG AAAACATGCA AATGGTGAGA ATGCTTGGAC TGGAATCGAC GGGGTTACTG GTGCAATAGC TGACATGAAA GAGAAAAAGA TATGGGATGC GTTCAATGTG AAGTCGCAAA CGATTGATGA TATAGTGAGT GGTATCAAGA AGAAGCAAGC TCCTGGAACT GGACCGACAA AGCCTACAAT TGAGACAGAA GGAGATGCAA ACAACGAGCA AATACTTCCC GACTAG 
Length1626
Protein Sequence
Protein Residue
Map Locationscaffold_3: 2225995.. 2229205
Download Sequence
A.thaliana
AGI-codeAT5G26360.1
DescriptionTCP-1/cpn60 chaperonin family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg490392 Transducin family protein / WD-40 repeat family protein
6.32456 Ahg353720 ARM repeat superfamily protein
16.7332 Ahg489562 Trypsin family protein with PDZ domain
18.8414 Ahg495104 Pentatricopeptide repeat (PPR-like) superfamily protein
23.7487 Ahg487121 Transducin/WD40 repeat-like superfamily protein
24.8193 Ahg484079
25.0998 Ahg477039 anaphase promoting complex 6
30.3974 Ahg482339 Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial
33.7639 Ahg484002 Exonuclease family protein
33.9411 Ahg941232 Protein prenylyltransferase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression