| Annotation |
|---|
| Description | jgi|Araly1|490392|fgenesh2_kg.6__3526__AT4G01860.2 |
| Sequence |
GAACTCAAGT CGGAGTCGGA GCCGCATTGT TGAAGCAAAG CCATGTCGGA AGAAAACAGC CGCCGGAAGT GGAACCCTCA CGCCGGTCCA TATCTCGGAG AAGTCTCTTC TCTAGCTTTC CTCAATCTCC CTCTACATGT TTCTTCAATT CCTTATCTTC TCGCCGGTTC CGGTTCGGAG ATTCTTCTTT ACGATTTGAG TTCCGGGGAA TTGATTCGCT CGTTTCAAGT GTTTGAGGGA GTTCGTGTCC ATGGAACTGT TTGTAGCAAC AGCTTTATTC ATTCAACGGA CCGATATACG TATAAACTTG TTATATTTGG AGAGAAGAAA GTGAAGATCT TTTCATTGAT TGTTGAATTA GCCTCGGGCT CTGGTGAAAT CTCTGTGAAT TTGGAAATTT TTGATTCTTT GCCGAGGCTT AGCAATTGGG TCTTCGACGT TTGTTTCTTA CAGGACTCTA CTGGTTCCTT GGGAGATGAA GACAAGCTTC TAGCTATTGG TTGTAGTGAT AACTCTCTCA GCATTTGGGA TGTTAAAGAA TCACGCATGG CTTTTGAAAT TCAGTCACCT GAAAGGTGTC TACTGTATAC TATGAGGTTA TGGGGCGACA GTATTTCGAC TCTCCGCATT GCTTCTGGCA CTATTTTCAA TGAGATCATT GTTTGGAGGA CAGTTGGCTT TGATGGTGAC AATGCCGACC ATGGACATTA TTCTGCTTCC CCTATGCTTA GACTTGCTGG ACATGAGGGT TCAATATTTC GCATTGTATG GTCTTTGGAT GGATCGAAAC TAGTCTCCGT CTCTGATGAT CGTAGTGCTA GGATATGGGA AATTGATTCG CAGGAGGTCG TTGGCCCTGT GCTTTTTGGT CACAGTGTTA GGGTTTGGGA CTGCTGCATC TCAGATTCTT TTATTGTCAC TGCTGGTGAG GACTGTACAT GCCGTGTCTG GGGTGTGGAT GGTACCCAGC TGGAAGTGAT AAAGGAACAT ATTGGAAGAG GCATATGGAG ATGTTTGTAT GATCCGAACT CATCCCTTCT TGTTACTGCT GGATTTGACT CTGCAATCAA AGTACATCAA TTGCATAATC GTGGGTCTGA AACGCTGTTA GATGCTGTAG GAGTGCTTAA TTCACCAGAT AAATTGGAAT ATTTTTCAAC CTGCCTCCCA AATTCGACGG AGCATACTGG TCTCACTGAC AGCAAGAGTG AGTATGTACG TTGCATGCAG CTCACACAGG AAGATACCAT TTATGTGGCC ACAAACCATG GTTGCTTGTA CCACGCAAGG TTATTGTCAT CTGGAAATGT AAGGTGGACT GAATTAGTTC GAATACCTGA AGAAGGGCCT ATTATTACCA TGGATGTCAT GTCTGGCGGA AAGGTACGCG AGTCTTGTGC ATTAGATGAT TGGGTTGCTC TTGGAGATGG CAAAGGAAAT ATGACAATTG TTCGGGTTAT TGGTGATATA TATAACCCAC ATGCTGGCTT GAATCAAAGT TGGAAGGCTA GCCCTGAGAG ACAACTTCTG GGGGCTTTCT GGTGCAAATC ATTAGGCTAT AGGTTTGTTT TTTCATGCAA TCCTAGAGGA CTATTGAAGC TGTGGAAACT ATCCGGTCCT TCAGAATCTG CTGCTTCTAG TGCTGCTGAA ACTTATGATG TCTCCCTCTT GGCTGAATTC TCCTCTTGTT TTGGAAAGCG AATAATGTGT GTTGATGCAT CAGTAGAAGA TGAGGTGATT CTGTGTGGAG ATTTACGTGG CAATATCACA CTCTTTCCTC TGTCAAAGGA CATGCTGAAC GGAGTTTCTG TTTCTTCAGA ATTGAAGATA CCTTCATTAA AATATTTCAA AGGTGCCCAC GGGATTTCAA GTGTTTCCAG TCTTTCAGTT GCTAGATTAA CTTCCAACAA AGCTGAAATA TGCTCGACTG GCGCAGATGG TTGCATATGC TATTTCGAAT ATGACAGAGA GAGGCAGACT TTAGAGTTCA TGGGTTTGAA ACAATTGAAA GAGTTGAACT TAGTTCAATC TGTTTGTCAA GGGGTGCAGT TTTCCAAAGA CCACCCAAAC AATGACTATG CAGCCGGATT TGCGTCAACA GATTTCATAT TGTGGAATTT AACAGCTGAA GCAAAGGTTA CACAAATCAC ATGTGGTGGA TGGCGCCGAC CCCATTCCTT TTATCTCGGG GAAATCCCTG AGTGGCAAAA CTGTTTTGCA TATTTGAAGG ATGATGTCAT TCATATTCAT AGACACTGGG TTGTGGGAAA GAAGACCAAA GTTTTTCCTC TAAATTTGCA TACACAGTTT CATGGCAGAG AATTGCATTC GTTATGCTTC ATCTCTGCAG ATACAAAAGC CGGGTTCGAT GAAAGTAAAT TATCTGATCG GTCTAGTTGG ATTGCAACAG GGTGTGAAGA TGGATCTGTA AGATTGACAA GGTATGTATC TGAGTTTGGA AACTGGTCAA CATCAGAGCT ATTAGGAGAA CATGTTGGAG GCTCAGCTGT GAGATCAGTT TGCTGCGTAT CAAATATGCA CATGATTTCT TCGGACATGC CTAACGTACC AGACGTGTGT GAACAAGACT CTGCAGTGGA TGATAGCGAA AGTCCTTGCT TACTGATTTC TGTTGGAGCC AAGCGTGTTG TAACCTCTTG GCTCCTAAGG AATGGTAGAC AAAATAAAAA GGGAGAACCT TGTATTAGTG ATAATGGACA CAATAGAGCT TCATCGGAAG TGTCTTCAGT GACATTCCAA TGGCTTGCTA CTGACATGCC AACCAAATCT CGTCCTTGTG GAAAGACCGA GAAATCTCCA AAATTGGACG GAGTTGATGA AGATACTACT GCTAACATCA CAAAGTTAGG GTCTAATACG TATCATGAGC GAGAAAACTA TGAAGATGAC TGGAGATACA TGGCTGCCAC TGCATTTCTT GTCAAATGTG TTGGTTCCAG GCTAACTATC TGTTTTATCG CTGTGGCTTG CTCTGATGCC ACCCTTACAT TACGGGCCCT AGTCTTACCA CATCGATTAT GGTTTGATGT TGCATCGTTG GTTCCTCTAA AATCTCCAGT TCTGTCATTA CAACACGCTG TTGTGCCTCT GCATCCCCCA CATGAAGGTA ATACATCATC TAGTGATGTT TATCTCCTCA TCAGTGGGGC CACAGATGGA AGCATAGCCT TTTGGGATGT AACTAAATGT GTAGAAGCTT TTGTAAAGCA AGTATCCAGC ATCCATATTG AGAAGTTCAT TGATTGTCAG TTACGACCAC GAACTGGAAG AGGGAGTCAA GGTGGTAAGA AATGGAAACT GTTAGGCTCC AAAATTTCTA AGAAACCACA AGAGAACAGC AACTCAGTTG GTGACGCTGC AGCCACGTCT TTGGAACTCA CAAATGGCGT TCCTCAGGAA AACCATGAAT ACGAAGGTGC AGATTCTCCT CTCGAGACAA GCGAGATAAA GCCTTCACAT GTCGTGAAGA ATGCTCATCA ATCTGGAGTT AATTGCCTTT ATGTTTCTCG CTCGAGCAGT TCTCCAAGTA ATGGCAATAG CTTGATGTTC AATGTGATTA GCGGGGGTGA TGATCAAGCC CTTCATTGTC TTAGCTTCAA CATCCTCAGT AGTAGTAATA GTCCAGCCAA AAAATCTGAA ATCATGGATC TAAACCAAAC CCCAAGTTAC AGAATCAGGC TCGCAGACCG TGGAGGTATT GCATCAGCTC ATAGCTCTGC CATAAAAGGC GTATGGATGG ACATGAACTG GGTGTTCTCG ACAGGTCTTG ATCAACGTGT ACGATGTTGG TTTCTCGACA AAGATAGTAA ACTGATCGAG CACGCTCATA TAGTTATCAG CGTGCCCGAG CCAGAGGCGC TAGATGCTAA AGCCATTGAT GAAAACCGAT ACCAAATAGC TGTTGCGGGA CGCGGGATCC AAATGGTTGA ATTCTCCGGT TACTAGGTTC AGAACCCAGT ATTTGATCCA TTTTTTGAGG TATTTGATCA GAACTGTGCT TTTGTCGGTG CTCTACTTTA TCTATTATTA GTCGCCGTCG GTGCTCTGCT AAATTCTGGT ATCAGTGGTA TGTATCATGT TTCTGAACCC AATTTGATAG TAACATTATT ATTGCTCATT TGGGTTATGG AATTGTGCCC ATGTGGGACC TTTATGAGAG AAAGATCAAC TCTTCACATG ACATTATTTA ATTCTTAATC AATCAATTCG ACTTATTAAT AGTAAATTAA GTTCTTTAGA GATTTGAATT GATTTGATGT GATTATACTA TTTCGTACAT ATAAATGTTT ATGAGAATTC GAATTCATTC TACGGTTTTT TTATAAGATT GTAACTACAG TATTATTTGA CTTT |
| Length | 4374 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 22588221.. 22595883 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G01860.1 |
| Description | Transducin family protein / WD-40 repeat family protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg317456 | TCP-1/cpn60 chaperonin family protein |
| 10.4881 |
Ahg326041 | structural maintenance of chromosomes 5 |
| 16.2481 |
Ahg484450 | |
| 17.7482 |
Ahg478554 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 18.9737 |
Ahg481405 | cellulose synthase 10 |
| 27.0555 |
Ahg323324 | RNA helicase, ATP-dependent, SK12/DOB1 protein |
| 30.5941 |
Ahg946316 | Pentatricopeptide repeat (PPR) superfamily protein |
| 32.8634 |
Ahg477039 | anaphase promoting complex 6 |
| 37.8682 |
Ahg913002 | DEA(D/H)-box RNA helicase family protein |
| 39.3446 |
Ahg493296 | binding |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|