Detail



ID : Ahg317721

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|317721|fgenesh1_pm.C_scaffold_3000737
Sequence
ATGGAACAGC AGGTTTTTGA CAAGAGTGTT GCTCTGTTTG GAGATTCCAA GCTGGTCAAT GACAGTTCTT CGATTCAGCT GACTGACTCA GTGAGTCAGA GCGAGGGACG AGTCTTTTAT AGGAAACCCA TCCATCTATT CAAAGGTAAA GAGAAGAACT CGGTTATTTT CTCGACTTAC TTCTCGTTTT CGATGCCCAA TGAGATTGGT GATGTCTTGG CTTTTGTAAT GGTTCCAAGT ACTTTGGATC TTAGTCTGTT TGGTAAGAAA GATTACAGTT CCTCTGCTTT CGGGTTTCTA CTAGAGTATG CAAAGAACGA GACAGTTGTT GCTTTTGAGT TTGATATCTC CAAGAGAGGA AACCGTGCAA GAATCTTAAT TGGTAGACCT GAATCTGCTA AAATTAGAAA TCTTTCGTTT GTGGGTGACT TGATGATGAA CAATGGAGGG ACTTTGAGCT GTATGATTGA TTATGAGGCA AGTTCTAAGA GAATGATGGT TCGATTCAGA AAACCTGGTT CGATAAAGCT GTTTGATCCA TTCTTCTCTT TCTCGGTAGA CTTGGAGAAG ACTTGGAAAG GTGGTGAAGT CATGGTGGGT TTAAGCTCTG CTAATGGGAA CTCTTCCAAG CCACATTTTC TCCATTCATG GAGCTTTGAA ATAAGGCATC TTGATCCGAT ATGGGTGCAA CCAACGCCAT TTGGACCGAA TGAAGGTTTG AAGCCGGACG TTTCCACGGA AGTGGAAGAG GGCCGAGAGA GAAGTGAGTG TATATGGAGA ATGCTTGGTA CTTTGGTCTT GGGTGCAGTA TGTGGAGCCT TAGGGGCAAT GTCAGCTATG TATCTTTGGA CAATATGCGG TGTTAGGAGG TCAATGGCCG TGGTTCCAGA GGAATGTGCA GTGAGCATTG TGGTCGTTGA TGTTAAAGAT GGCAAGAAGT AG 
Length942
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3423686.. 3424613
Download Sequence
A.thaliana
AGI-codeAT3G09190.1
DescriptionConcanavalin A-like lectin family protein
TAIR curator summaryRegulates flowering time in Ws ecotype.
Alias
Gene coexpression
MR
MR Locus Description
5.19615 Ahg472412 P-loop containing nucleoside triphosphate hydrolases superfamily protein
17.1464 Ahg908302 Leucine-rich repeat protein kinase family protein
25.3969 Ahg470907 Plant-specific transcription factor YABBY family protein
35.4683 Ahg477773 Domain of unknown function (DUF3444)
37.9473 Ahg489123 cellulose synthase-like A02
51.5364 Ahg482009 actin-related protein C1A
52.3068 Ahg920592 conserved peptide upstream open reading frame 55
54.827 Ahg488618 root cap 1 (RCP1)
59.5315 Ahg477915 Heavy metal transport/detoxification superfamily protein
64.9923 Ahg483612 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression