Detail



ID : Ahg477773

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477773|fgenesh2_kg.3__474__AT3G04960.3
Sequence
TTTCTGGTAA AAATGGTCTC TTTCTCTCTT CTTTTCTTCT TAATAAGTCT ACAAAAACAG AAACAAAAAT AAAAATTAAA GCTTTCTCAA AAAAATCTCA CCTTTATCTT CTTCTTCCTC TCTTTGTGCC CTCTTTCAAC ATTCTGAGTA CAGAGAGAAC TAAGTTTAGA TCCATGGAAC CTGCAAATTC TTCACCATTG CCACGAGGCA CGCCGGAGCA AAGTGAAGAT CAGTCTCGAG GAATACTTAG GGTTTCTGCT TATGAGCTTA TGGTAGTGGA CAGTGATTTA GAGGGGTTAG ACCAAAAAAA GGAGGACATG CGTAAAATGT TTAATCAGAT TCAGGATAAA ACTTCACTAA TTCTTCAGTT CTCGCTTAAG TGGGAAGAAA TCGACGAGAA GTTTGGTTTT CTAAAGCAAC GAGCCATGGA AGTATCTTTG AAGGAGGAAT CTGTAAGGAA TCAGATTCTG GAGCTGGAGA AGAAGGAAGA GAGGCTGAGG CTTGTTGAAG AGAGAGAGAG GGAGATTGAG GCTTCCATCA GTGCCTTGCA GGAGAAAGAA AATGAATCTG ATCTGATACT GTTTATGGAA GCGAATGTGA TGAGATTGGT TCTGCAAATG CAGTTTGAAG AAGTGGTGGT TTCTCAGCTT AACGCTCAAG AGAAATTTCT TGGTTTGCTC CATGATTCGG TGATGAAGAA GCATGAAGAG CTAATGACAG AGCTTGAAGC AAGGAAAAAT GAGGTTGCTT TGATTTCTAA GACGATCGAT GACAAGACTT GTGATTTAGA GATGAAAGTT AAAGACTTCG ATCTTAAGCA AATAGCTGAG TCTGAGAGAA TGAGAAAGGA GACTGAGGTG GTGGAAACAT CTCTTAAGCA ACTTGAAGCG AGGGAGAATG AGCTTAGGTT GCTTAATGAG ACCATCCAAG AGAAATCGAT TGAACTGGAG AAGAAAGAAG AGAACTTTCA ACTGAAACAA GAAGCAGCAG CCAGAGAGAC TGAAGTGAAG AACAAGTTTC TTGAGTTAAA GGAAAAGAAA CTTGAAGAAA GGGAGAAAGG TTTGGAGTTA AAACAGAGAG AAATAGAAGA ACGAGCAATA GAAGCAGAGA CTCGTAAGAG AACTAGGCTT GAATATGAGT CTCCATTGTC AACAGAGAAG GGTAGAGATG GTGAGACTCT GATTCTCCCT GGAAAAAAGC AAGTACAGAG AAGAGAGGCT CATGAAGTTG TCTGCATAGA TGAAGATAAG CCATTCACTT GTCCTGATCC AGACTTTCAC GATTTTAACA ACACAATAAG CTCTTTCGCT GTTGGTCAAG TATGGGCTCT ATATGATCCT ATAGATGATA TGCCTCGATA CTATGCTCAG ATCAGGAAAG TATTGAAACC TCAGCTGGGT TTACGGGTGA CATGGCTTGA ATCAGTACAG ACATCAGAAA ACGAGGAACC AATTCCTGCT TGTGGGAGAT TCAAACATGG AAAACCAGAG TCAGAGACCA GAAGCCACTT GATGTTTTCT CATGAGATGT ACTGCATCAA ACGTGGCAAA AATGTCATAA TAAACCCGAG AAAAGGCGAG ACGTGGGCCC TTTTCAGAGA TTGGACCAAG ACTTGGAAGA GTCACAGTGA GCAACACAAG TCTCCTTACA GATACGACTT TGTGGAAGTC CTGACTGAAT TTGACAGTGA TCGAGGCATT GGAGTGGGCT ATCTAGGAAG AGTGGAGGGA TTCACATCAT TGTATAAACA TGCTGAGCAA AATGGTCTTG TCAAAATTAT GATATCATGT GATGAAATGG TTAGGTTTTC TCATAGAGTT CCGTCTTTCA AAATGACTGG AGATGATAAA GAAGGAGTCC CAGCTGGCTC TTTTGAGCTA GATCCTGCCG CTGTTCCTCG AGAGTATCTT AAAGATGCTA ATGTCAAAGA AGAAAAGATG GAGCCCATAG TCTTGGTTTG AGTTAAGTGC AAGTCTGATG TGTTCACTGT TCTTTATCTA TAAAATGTAT TTAGAAGATG CATGGAACTG TATCTGTATT CC 
Length2042
Protein Sequence
Protein Residue
Map Locationscaffold_3: 1696889.. 1699266
Download Sequence
A.thaliana
AGI-codeAT3G04960.3
DescriptionDomain of unknown function (DUF3444)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.24264 Ahg489873 RmlC-like cupins superfamily protein
9.59166 Ahg950270 Transducin/WD40 repeat-like superfamily protein
11.225 Ahg486707 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
12.6491 Ahg491344 ABC transporter family protein
15.8745 Ahg477718 Nucleotidylyl transferase superfamily protein
24.3721 Ahg334205 20S proteasome beta subunit G1
29.4618 Ahg319546 phytochrome interacting factor 3-like 5
35.4683 Ahg317721 Concanavalin A-like lectin family protein
36.3318 Ahg921711 microtubule-associated proteins 70-2
39.5727 Ahg472287 Spc97 / Spc98 family of spindle pole body (SBP) component
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression