Detail



ID : Ahg318077

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|318077|fgenesh1_pm.C_scaffold_3001093
Sequence
ATGGCAGATG GGAAGTCAAG ATTCACGGTG GATAAAGCTC TTGTGGCGAT GGGATTTGGC AAGTTCCAGC TTTACGTCCT TGCTTACGCT GGAATGGGTT GGGTTGCAGA GGCCATGGAG ATGATGCTTC TCTCTTTCGT AGGACCTGCT GTTCAATCGC TCTGGAATCT CTCTGCACGA GATGAAAGCT TAATTACCAG TGTCGTTTTT GCTGGCATGC TCATTGGAGC TTACTCTTGG GGCATTGTTT CTGACAAACA TGGCCGCAGG AAAGGATTTA TCATAACTGC GGTGGTGACT TTTATAGCTG GTTTCTTGAG CGCCTTTTCA CCAAACTACA TGTGGTTGAT CATTCTTCGC TGTTTGGTTG GTCTTGGGTT GGGAGGAGGT CCTGTTCTTG CTTCTTGGTA TCTTGAATTC ATACCTGCAC CAAGCCGAGG GACTTGGATG GTTGTTTTCT CAGCTTTCTG GACCGTTGGA ACCATATTCG AGGCTTCCCT TGCTTGGGTG GTCATGCCAA GTCTGGGTTG GAGGTGGTTA CTTGCACTCT CTTCTGTACC TTCATCGTTG CTTCTTCTCT TCTATAGGTG GACATCCGAG TCTCCTCGGT ACTTAATCCT ACAAGGCCGG AAAGCTGAAG CTCTTTCCAT ATTAGAGAAG ATTGCGAGAA TGAACGGAAC CCAACTACCT CCGGGTGTTC TCAGTTCAGA ATTGGAGACC GAGCTGGAAG ACAATAAAAA CCTTCCAACA GAAAACACTC ATCTTCTCAA GCCTGGAGAA ATTGGAGAAG CTGTTGCTGT GTCCAAGATT GTACTAAAAG CTGATAAGGA ACCAGCTTTC TCGTTACTAG CTCTTCTATC TCCAACGCTA ATCAAGCGGA CTTTGCTACT ATGGATTGTG TTCTTTGGAA ATGCGTTTGC TTATTATGGC GTTGTCCTTC TCACCACTGA GCTGAACAAT TCCCATAACC GCTGCTATCC AACCGAGAAA CAGTTGGGAA ATTCAAACGA TGTTAACTAC AAGGACGTTT TCATCGCCAG TTTTGCAGAG TTTCCAGGTC TACTGATATC AGCAGCAATG GTGGATAGAC TTGGACGAAA AGTTTCAATG GCATCAATGT TATTCACATG TTGCATTTTC CTTCTCCCTC TGTTATCTCA TCAATCTCCA TTCATAACCA CTGCTCTTCT CTTTGGTGGC CGTATCTGCA TCTCGGCGGC TTTCACAGTG GTTTACATAT ATGCTCCGGA GATATATCCA ACGGCAGTGA GAACAACTGG AGTAGGAGTG GCGAGCTCGG TAGGACGAAT CGGAGGAATC TTGTGTCCAC TAGTGGCCGT TGGATTAGTT CACGGATGTC ATCAGACGAT CGCTGTTCTT CTGTTTGAGG TTGTGATTCT TGTCTCAGGA ATTTGCGTTT GTCTCTTCCC TTTCGAGACA AGTGGTCGTG ATCTGACAGA TAGTATCTCG GCGTCCAAAG AACCACCTTC AGCTTCCGTA TAG 
Length1503
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4962604.. 4964598
Download Sequence
A.thaliana
AGI-codeAT3G13050.1
DescriptionMajor facilitator superfamily protein
TAIR curator summary
Alias[AtNiaP][NiaP][nicotinate transporter]
Gene coexpression
MR
MR Locus Description
5.65685 Ahg490510 digalactosyl diacylglycerol deficient 2
6.40312 Ahg475711 Translation initiation factor eIF3 subunit
6.48074 Ahg483334 vascular plant one zinc finger protein 2
8.66025 Ahg496460 Protein of unknown function (DUF1645)
10.3923 Ahg473874 20S proteasome alpha subunit F2
15.0997 Ahg479119 Protein phosphatase 2C family protein
20.9762 Ahg936128 uvrB/uvrC motif-containing protein
23.8118 Ahg925691 Arginyl-tRNA synthetase, class Ic
25.4558 Ahg478776 transmembrane nine 7
30.249 Ahg349470 Mitochondrial substrate carrier family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression