Detail



ID : Ahg473874

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473874|fgenesh2_kg.1__3828__AT1G47250.1
Sequence
AAACGAAAAG CTTTTGACGA AAAGATGTTC AGGAACCAGT ACGACACAGA TGTGACTACA TGGTCACCAA CAGGTCGACT ATTCCAAGTC GAATACGCCA TGGAAGCTGT GAAGCAAGGC TCAGCCGCAA TCGGACTTAG ATCTCGCTCA CATGTCGTCC TCGCTTGTGT CAACAAAGCA CAATCAGAGC TCTCTTCTCA TCAAAGAAAG ATCTTTAAAG TCGATGATCA TATTGGTGTT GCTATTGCTG GTCTAACTGC TGATGGTCGT GTTCTGTCTC GTTATATGAG ATCTGAGTCT ATTAATCACT CTTTTACTTA TGAGTCTCCT CTTCCTGTTG GTCGTCTTGT TGTTCGTCTT GCTGATAAAG CTCAGGTATG TACCCAACGT TCATGGAAAA GGCCTTATGG TGTTGGTTTG CTGGTAGGTG GATTGGACGA GTCAGGAGCT CACCTCTACT ACAACTGCCC TAGCGGAAAC TACTTTGAAT ATCAAGCATT TGCTATTGGG TCTCGTTCAC AAGCTGCGAA AACATATCTG GAACGCAGAT TCGAGAGCTT CCAAGAATCA TCAAGAGAAG ATCTGATCAA AGATGCTATT ATGGCCATAA GGGAAACATT GCAAGGGGAA ACACTGAAGA GCTCACTCTG CACTGTTTCT GTTCTAGGAG TCGATGAACC CTTCCATTTC TTGGACCAGG AAAGCATACA AAAGGTGATT GATACGTTTG AGAAGGTTCC CGAGGAAGAG GAGGATGCTG GTGAGGGTGA GGCCGAACCC GAAGCTGCTC CTGGTGCTGC TGGAACTGGT GAACAAGGTG GTTCAGGTGA TCAAGATGTT GCACCAATGG AAATTTGAGC AAGTGGGAAT ATGTTAAAAG TTGGGTTTTC AAATTAACTT GCTTGTGTTT AGCTCTTTGG TCTGTTCCAA TTTAACAGCT TGGGACAAGA AGTTATTGAG TGACACTAGC TTATATTTAG TCCTATTTAA GTC 
Length993
Protein Sequence
Protein Residue
Map Locationscaffold_1: 22518889.. 22520778
Download Sequence
A.thaliana
AGI-codeAT1G47250.1
Description20S proteasome alpha subunit F2
TAIR curator summaryEncodes 20S proteasome subunit PAF2 (PAF2).
Alias[PAF2][20S proteasome alpha subunit F2]
Gene coexpression
MR
MR Locus Description
4.79583 Ahg487814 26S proteasome regulatory subunit, putative (RPN5)
6.32456 Ahg484492 translocase of outer membrane 20 kDa subunit 3
7.07107 Ahg483117 appr-1-p processing enzyme family protein
9.16515 Ahg494092 Cysteinyl-tRNA synthetase, class Ia family protein
10.3923 Ahg318077 Major facilitator superfamily protein
12.2474 Ahg484298 Small nuclear ribonucleoprotein family protein
13.4164 Ahg358061 Tetratricopeptide repeat (TPR)-like superfamily protein
16.9706 Ahg471723 CASC3/Barentsz eIF4AIII binding
17.2337 Ahg928387 Sterile alpha motif (SAM) domain-containing protein
21.4942 Ahg920014 Synaptobrevin family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression