Detail



ID : Ahg318682

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|318682|fgenesh1_pm.C_scaffold_3001698
Sequence
ATGGAGGTGT GGCATTTCCA GATTGCTGTC TATTTCGCTT TCGGATTCTT CTTCTTGAGG CTTTTCCTCG ATAGATTCGT CTTTCAAAGG ATAGCTGTTT GGCTTTTGAG TACCGGTTCT TCTCCGGTTA AAATGAATGA TGCTACTACT CGGGCAAAAA TCGTCAAATG CAAGGAGTCT TTGTGGAAAT TGTTGTATTA CGCTGGTTGT GACTTTTTCG TTCTTCAAGT CGTTTATCAC GAGCCGTGGG CTAGAGATAT CAAACTCTAC TTCGACGGTT GGCCAAATCA AGAGTTGAAG CTTTCAATAA AGCTTTACTA TATGTGCCAG TGCGGGTTTT ATGTGTATGG TGTGGCTGCG TTGCTTGCAT GGGAGACAAG AAGAAAGGAT TTTGCTGTCA TGATGTCTCA CCATGTAATT ACAATCATCC TGCTTAGCTA CTCCTACTTA ACCAGTTTTT TCCGGATTGG AGCAATCATC CTAGCCCTTC ATGATGCAAG TGACGTGTTT ATGGAAACTG CTAAAATTTT CAAGTACTCT GAAAAAGAAT TTGGAGCAAG TGTGTGTTTT GCACTATTTG CTCTCTCCTG GCTATTGCTA CGGTTGATAT ACTTCCCATT TTGGATCATC TGGGCCACGA GCATTGAACT CCTGGATTAT TTGGATATGA CATCAGCTGA AGGCACGATC ATGTACTATT CTTTCAACAC AATGTTACTG ATGCTTCTCG TTTTCCACAT ATATTGGTGG TATCTTATAT GTGCCATGAT TGTAAGACTA CTTAAAAACA GAGGAAAAGT TGGAGAAGAC ATAAGATCCG ATTCAGAGGA TGATGATTAG 
Length840
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7827367.. 7829175
Download Sequence
A.thaliana
AGI-codeAT3G19260.1
DescriptionLAG1 homologue 2
TAIR curator summaryLAG1 homolog . Loss of function mutant is sensitive to AAL-toxin. LOH2 is presumed to function in sphingolipid metabolism.
Alias[LAG1 HOMOLOG 2][LOH2][LONGEVITY ASSURANCE GENE1 HOMOLOG 2][LAG1 homologue 2]
Gene coexpression
MR
MR Locus Description
27.4044 Ahg478178 Protein kinase superfamily protein
35.1568 Ahg938283 Leucine-rich receptor-like protein kinase family protein
65.0692 Ahg327678 cyclic nucleotide-gated channel 13
69.6491 Ahg942355 carbon/nitrogen insensitive 1
72.0555 Ahg485838 SAC3/GANP/Nin1/mts3/eIF-3 p25 family
83.857 Ahg481720
89.8332 Ahg477824 receptor like protein 30
93.4666 Ahg484411 plant intracellular ras group-related LRR 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression