Detail



ID : Ahg318845

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|318845|fgenesh1_pm.C_scaffold_3001861
Sequence
ATGAACGCTC CGATCATAGA TCCATTGCAA GGAGATTTTC CGGAGGTGAT TGAAGAATAT CTGGAACATG GTGTCATTAA ATGTGTTGCC TTTAACCACC GTGGTTCTCT TCTCGCTGCG GGATGTGCCG ATGGGGGATG TGTAATCTGG GATTTCGAAA CTAGAGGCAT TGCAAAGGAG ATTCGTGATA ATGATTGTTC TGCTGCTATA ACAAGTGTCT CCTGGTCCAA ATATGGGCAC CGCTTGCTTG TGTCTGCTGC AGACAAGTCA TTAACTCTTT GGGATGTCTC TACCGGAGAG AAGATTGCTC GTACGATTCT TCAGCAGACT CCGTTGCAAG CTCGTTTAAA CCCTGGCTTG AGTTCTCCTT CTCTCTGTCT GGCGTGCCCG CTCTCTTCTG CTCCGATGAT TGTTGACTTT GATATTGATT GTACAACTTT GCTTCCAGTC GCTGTGCCTG AGATGCCTGA TGTATTAGCT CCTCCACAAC GCAGTAAATG TCCTGAATCA AATCCTCCTT TCTCTCCAGC TGCAGCATGC TTTAACAAGT GTGGGGATCT TGTTTATATA GGTAATTCCA AAGGAGAAAT ACTTATAGTT GATTATAAAA GTGTTCGAGT TCTTGCTTTG GTTCCTGTGC CTGGCGCGGC ACCTGTGAAA AACATAGTGT TTAGCAGGAA TGGGCAGTAT CTTCTCACGA ATTCACATGA TCGAACCATT AGGATATATG AAAATCTTCT CCCAGCAAAA AATGTGCTTA GATCCCTTGA GGACTTGGGA AAGAACATAG ATGGGCTTGA TGGTGTTGAG AAAATGAAGA CTGTTGGATC AAAATGCTTA ACACTCTTCA GGGAATTCCA AGATTCAGTT ACAAAAATGC ATTGGAAAGC GCCTTGTTTC AGTGGTGATG GTGAGTGGGT AGTTGGGGGT TCTGCGTGCA AAGGGGAACA TAAGATCTAC ATATGGGATC GAGCGGGGCA TCTTGTGAAA ATTTTAGAAG GTCCTAAAGA AGCGTTGATT GATCTAGCTT GGCATCCTGT TCATCCCATA ATCGTCTCTG TTTCCTTGGC GGGTCTAGTA TATATTTGGG CAAAAGATTA CACAGAGAAC TGGAGTGCAT TTGCTCCGGA TTTCAAGGAG CTTGAGGAGA ACGAAGAGTA TGTGGAACGC GAAGATGAAT TTGATTTGAT ACCTGAAACA GAAAAGGTGA GAGTATTAGA TGTTAATGAA GATGAAGAAG TTGACATAGA GACAGTGGAA AAGGATGCTT TTAGTGATTC AGATATGTCA GTGGAGGAAC TCCGCTACCT TCCAGCTGAA CCGATCCCAG ATACAAATGA CCAGCTAGAC AATTTGGTTG AAAGCATCAA GTTAATTGAA GGTCAGATAT CTGCATCTCC AGCTTCTGAA GAGGCTGGTC AGAATGGACA CCATGCATCA AGTCCACAAG GAGATGATGT CGTTACTAAT GCATGGCTCT CTATTGCAGA AGAAATGGGT GAGACACGAG GAAAGAGAAA AAGGAAACCA TCAGAGAAAG CCATGGAGCT GCAGGCAGAG AAGGCAAAAC CATTGAAAGG GTCAGGCAGA ACAGTAAGAG CAAAAGGCAG AGCAGGAGTT GATCAAGAAA CCGATGACAG CATAAATGGC GATGATGATG ATGATGATGA TGCATATTAT TAA 
Length1683
Protein Sequence
Protein Residue
Map Locationscaffold_3: 8763176.. 8765290
Download Sequence
A.thaliana
AGI-codeAT3G21060.1
DescriptionTransducin/WD40 repeat-like superfamily protein
TAIR curator summary
Alias[RBL][RbBP5 LIKE]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg932394 Protein of unknown function (DUF788)
11.4018 Ahg931395 golgin candidate 1
18.6011 Ahg890214 nucleotide binding;nucleic acid binding;RNA binding
24.6577 Ahg493035 Trimeric LpxA-like enzyme
25.6125 Ahg357185
30.3315 Ahg947135 chromosome-associated kinesin-related
34.641 Ahg945271 vacuolar protein sorting 26B
38.7298 Ahg354063
45.4313 Ahg935321 Mitochondrial transcription termination factor family protein
45.6946 Ahg493583
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression