Detail



ID : Ahg493035

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493035|fgenesh2_kg.7__2468__AT4G18300.1
Sequence
ATGGGTGCTC AGAAGAAACC CGCCGTGGCT AGGGTTCGAG ATGATTCGGA GGATCTGACT CGTCAACGGT TACAAGCCAT AGTTCTAGCG GACAGCTTCA CCACTCAATT CCGTCCCATA ACCCTAGAAC GCCCTAAGGT ACTATTGCCG CTAGTGAACA TCCCGATGAT TGATTACACT TTAGCATGGC TCGAATCAGC TGGAATCGAA GATATTTTCG TGTTCTGTTG TGTTCACTCG TCCCAGGTCA TCGATTACCT AGAGAAATCC GAATGGTACT CACGCTCAAA CCCAAACTTG TTGGTGAGAA CGATAGTGTC TCCCAAATCC ACCAGTGTTG GAGATGCTCT GCGTTATATA TATGAACAAC AGACAGAGAC GTCTCAGATT CAAGGTGATT TTGTTCTTGT TAGTGGGGAT ACTGTTAGTA ATATGCCACT TGCTGATTTG ATTCAAGAAC ATAGAGATAG GAAGAAGAAA GATGAGAAAG CTATCATGAC TATGGTTATT AAGAAGCAGT CTAGACTAGG ATTAGGATCT GATCAACTCT TCATTGCGGT AGATCCTTTA ACGAAACAGC TTGTTCGTTA CGAGGAAGGT AATGCGAGAA TCGGGGACGT TTGCTTAGAT AAGTCATTGT TGGATAGTAC TGTTTTACTA TGCAATGATA TGCAGGATTG TTACATTGAC ATTTGTTCTC CTGAGGTGCT TAGTCTCTTT GAGGATAACT TTGATTATCA ACATCTGCGC CGTCATTTTG TCAATGGTTT GCTTGTTGAT GATATTATGG GTTACAAGAT TTTTACTCAT GAGATTCAGT CGAGTTTTTA TGCTACAAGG ATTGAAAATT TACGGAGCTA TGATATGGTT AGCAAGAATA TAATCCAGAG GTGGACATAC CCGTTCGTAC CTGATATCAA TTTCAGCGGA AAATGCTCTC TAATGCTCGG GAGACAGGGG ATATACCGGG CTTCTGATGC AGTTCAATCA CGCTCTGCTG ATATTGGAGC TTCCACTGTC ATTGGATACG GCACCAGAAT TGGTAATGGA GGTAAAATCT TTAACTCTGT TATTGGGAAT GGATGTTCTA TTGGATCAAA TGTCGTGATA GAAGGCTCGT ACATATGGAA CAATGTTACG ATTGAAGATG GGTGTGAGAT AAGGAATGCT ATTGTCTGTG ATGGAGTGAA AATCAGAGCA GGAGCTGTTC TGCAGCCTGG TGTTGTTTTG TCTTTCAATG TTGTAGTTGG GCGGGACTTT GTTGTACCTG CATATTCAAA GGTCTCTTTA CTTCAACAGC CAACTACAGA AGACAGCGAT GAAGAGATGG AATATGCTGG TAGTAGCAGC GAGACTGCAG ATCTTTTATC AGGTGTAAAT AATTTGCAAA TTGAGTCCAA AGCATCTGAG CTTGGTCCTG ATGGAACAGG TTACATATGG GAAGTATGTG ACAGCGCTCA TGATGAGGAG TGGAAACATT CTGTTGTACC AATCCCCATG GATAAACTTG CCGATATCAC TCAGGCCATG GACGATGATG ACATAGAGGA TGAAAGTGTT GTCCCACCTG CTGGAGAGTT GAAATCCGAT ACTGATAGTA TTAACACTGA TGCAAATGAT GACTATGGCT ACTTTGAGAG AGAGGTTGAA GAAACCTTCT TAATGGCCAT TATTAAGGAT GATCTGGACC ATGTAATTCG CTTGATTAAC TCACGCCGAT TTGCGTACAA CATGGCATCT GCAGATTGTG CTGGAGCAGT ATTCTACTCT ATGATGAGAC TGGCAGTAAA TACTCCACAT AATTCTGCTA GTGAATTGTA CAGAAACGCA ACGACTATCA TTACTAAATG GAAGGGACTT CTTGGGTTTT ATTTAAAGCA AATTGATGAA CAGATAGAGG TGATGATGAA ATTCGAAGAG ATGTGTGAGG AATCTGAAGA GTTGGGGCCT TTGTTTGCTA AGATTGTGCA TTTTCTGTAT GACAAAGACG TGGTGCAAGA AGATGCGATA TTGAGATGGG GGGAAGAGAA AGCAGGCGCA GACGAATCTG ACAAAGTTTA TCTGAAACAA TGTGAGGCAT TCATACAGTG GCTCAAGGAA GCATCTGAGG AGGAAGAAGA AGAAGAAGAT AGCTGA 
Length2136
Protein Sequence
Protein Residue
Map Locationscaffold_7: 10215225.. 10217357
Download Sequence
A.thaliana
AGI-codeAT4G18300.1
DescriptionTrimeric LpxA-like enzyme
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14.6969 Ahg477057 Pseudouridine synthase family protein
15.4596 Ahg491480 Pentatricopeptide repeat (PPR) superfamily protein
16.8819 Ahg947066
19.4422 Ahg496364 Arabidopsis thaliana protein of unknown function (DUF794)
21.9773 Ahg922436 RING/FYVE/PHD zinc finger superfamily protein
24.6577 Ahg318845 Transducin/WD40 repeat-like superfamily protein
30.4959 Ahg479641 RNA-binding (RRM/RBD/RNP motifs) family protein
33.8231 Ahg480586 F-box family protein with a domain of unknown function (DUF295)
51.2445 Ahg938652 F-box and associated interaction domains-containing protein
52.915 Ahg322516 cleavage and polyadenylation specificity factor 73 kDa subunit-II
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression