| Annotation |
|---|
| Description | jgi|Araly1|320780|fgenesh1_pm.C_scaffold_4000837 |
| Sequence |
ATGTTAACGG CAGATATACC ACCGAATCAA TCAATCTACA TCCAAAACCT CAACGAAAAG ATCAAGAAAG AAGAATTGAA GAGATCTCTT TACTGTTTGT TCTCTCAGTT TGGGAGGATA CTTGATGTGG TTGCTTTGAA GACTCCGAAA CTCCGTGGAC AAGCTTGGGT TACATTTAGT GAAGTCACAG CTGCTAGCAA TGCCGTTCGT CAGATGCAAA ATTTCCCCTT CTACGATAAG CCAATGCGCT TACAATACGC AAAAGCAAAG TCAGATTGTC TAGCTAAAGC CGAGGGAACT TTCATTCCAA AAGATAAGAA GAGGAAGCAA GAAGAAAAAG TTGAAAGAAA GCGTGAAGAA TCCCAACGAC CAAACACGGC TAATGGCCCA AGTGCTAATG GTCCAAGTGC CAATAATGGA GTCCCTGCGC CATCCTTCCC ACCGAGCGGG CAAGAAGCGA TGCCACCAAA CAACATACTC TTCATTCAGA ATCTCCCACA CGAGACAACA AGCATGATGC TTCAGCTTCT CTTCGAACAA TACCCTGGAT TCAAAGAGAT AAGAATGATC GACGCAAAAC CAGGAATCGC GTTTGTGGAG TATGAAGACG ATGTTCAAGC TTCCATAGCT ATGCAACCTC TTCAAGGTTT CAAAATCACT CCCCAGAATC CAATGGTCAT CTCTTTTGCC AAGAAATAG |
| Length | 699 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 13388783.. 13390471 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G30260.1 |
| Description | U2 small nuclear ribonucleoprotein B |
| TAIR curator summary | encodes U2B", which is a component of the U2 snRNP complex. Its precise role in pre-mRNA splicing is still unknown. It has been suggested that U2B0 may not be required for the splicing reaction itself but may have a role in U2 snRNP biogenesis. Deletion analysis of the U2B0 gene fusion has identified the N-terminal RNP-80 motif as sufficient for localization to the coiled body and the nucleus. |
| Alias | [U2B''][U2 small nuclear ribonucleoprotein B] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg471077 | U2 small nuclear ribonucleoprotein A |
| 10.583 |
Ahg478935 | RAB GTPase homolog A1G |
| 13.1909 |
Ahg474701 | TBP-ASSOCIATED FACTOR 6B |
| 13.9284 |
Ahg483630 | structural constituent of nuclear pore |
| 16 |
Ahg493988 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| 18 |
Ahg488118 | Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein |
| 20.7846 |
Ahg940390 | |
| 22.2711 |
Ahg934539 | CAX-interacting protein 2 |
| 25.7682 |
Ahg947562 | RING/U-box superfamily protein |
| 29.6985 |
Ahg922123 | GTP binding |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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