Detail


ID : Ahg474701

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474701|fgenesh2_kg.1__4655__AT1G54360.4
Sequence
ATGGTGACGA AGGAATCCAT TGAAGTGATA GCTCAGAGCA TTGGACTCTC CAGTCTTTCT CCGGAAGTCT CAGCGGCTCT TGCTCCCGAT GTCGAGTATC GTGTCCTAGA GGTGATGCAG GAAGCTATCA AATGCATGCG CCATGCTCGC CGCACCACTT TAATGGCTCA TGATGTCGAT TCTGCTCTTC ATTTCAGGAA TTTGGAGGTT TCCTCTTCCT CTCTTCTCCT GCCTACCTCC GGCTCCAAAA GTATGCGGTT CAAGAGAGCT CCTGAGAACA GAGATCTCTA CTTCTTGGAT GACAAAGATG TCGAGCTCAA GAATGTTATC GAAGCTCCTC TACCAAATGC ACCTCCTGAT GCATCTATTT TCTCTCATTG GTTGGCAATT GATGGTATTC AACCTTCCAT TCCACAGAAT TCTCCTCTCC AAGCCATATC TGACCTTAAA CGATCGGAAT ATAAGGACGA TGGCTTGGCT GCTAGACAGG TGCTCTCTAA GGACCTTCAG ATTTACTTTG ACAAAGTCAC CGAGTGGGCT TTGACTCAAT CTGGCTCCAC CCTCTTTAGA CAAGCACTCT CCAGCTTGGA AACTGACCCT GGACTCCACC CTTTAGTTCC CTTTTTCACT TCTTTCATCG CTGAAGAGAT TGTCAGGAAC ATGGATAATT ACCCAATCTT GTTGGCTTTG ATGCGTCTTG CTAGAAGCCT CCTTCATAAC CCTCATGTAC ATATTGAACC ATATCTGCAT CAATTCATGC CGTCTATTAT CACTTGCCTC ATTGCCAAGA GCTTAGGAAG AAGGTCATCT GATAATCACT GGCACTTGAG AAACTTCACT GCCAGTACAG TTGCTTCAAC GTGCAAAAGG TATGGACACG TTTATCACAA CTTGTTGCCG CGTGTTACAA GATCACTGCT TCATACCTTT TTGGACCCAA CCAAGGCACT TCCACAACAC TATGGGGCAA TTCAAGGGAT GGTAGCCCTT GGGCTTAAAA TGGTTCGCTT TCTTGTTCTC CCAAACCTAG GGCCATATTT GCTGCTTCTT TTACCTGAAA TGGAACCTGA GAAGCAGAAG GACGAAGCGA AGAGGCACAG GGCTTGGCTC GTTTATGGAG CGTTGATGGT GGCAGCTGGT CGATGCCTAT ATGAGAGGCT TAAAACATCT GAGACACTGC TGTCTCCTCC AAATAGCTCT GTCTGGAAGA CAAATGGAAA GCTTACCAGT CCCAGCCAAA GTAAACGCAA GGCAAGTAGT GACAACTTAA CTCATCAACC ACCACTGAAA AAGATAGCAG TAGGGGGAAT TATGCAAATG AGCTCCGCAC AGATGCAGAT GCACGGAACC ACAACAGTCC CGCAACAGTC GCTAGTTGGA AGGGACATTG CTCCGAGGAC TTCAGCTGCT CTGGGTACTG ACGTGGACAA CTATCTCTTT CCTCTTTTTG AATATTTTGG CGAGAGCATG CTTATGTTCA CCCCCAAACA TGAGCTCAGT TTCTTCTTGT AATAGATCAT TTACATGCAA GTGTTTGTAC CACAATGAAT ACA
Length1553
Protein Sequence
Protein Residue
Map Locationscaffold_1: 28319419.. 28322288
Download Sequence
A.thaliana
AGI-codeAT1G54360.2
DescriptionTBP-ASSOCIATED FACTOR 6B
TAIR curator summaryEncodes one of two Arabidopsis proteins with significant similarity to the histone fold TBP-associated factor TAF6.
Alias[TAF6B][TAF6B1][TAF6B2][TAF6B4][TBP-ASSOCIATED FACTOR 6B][TBP-ASSOCIATED FACTOR 6B1][TBP-ASSOCIATED FACTOR 6B2][TBP-associated factor 6B4]
Gene coexpression
MR
MR Locus Description
1 Ahg492636 Uncharacterised protein family (UPF0041)
2.44949 Ahg472093 DNAJ heat shock N-terminal domain-containing protein
3 Ahg486936 HEAT repeat-containing protein
5.2915 Ahg478983 Leucine-rich repeat (LRR) family protein
6.63325 Ahg488313 Protein kinase superfamily protein
6.63325 Ahg493091 Peptidase M20/M25/M40 family protein
7.93725 Ahg933395 splicing factor PWI domain-containing protein
8.94427 Ahg470910 chloroplastic NIFS-like cysteine desulfurase
10.6771 Ahg495757 IAA-leucine resistant (ILR)-like 1
12.1244 Ahg495390 polypyrimidine tract-binding protein 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression