Detail



ID : Ahg322718

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|322718|fgenesh1_pm.C_scaffold_5000262
Sequence
ATGTTGCAGA AGATTTCTCA GTCTCGTTCT TTATTTAACG GCGATAAATT AACGCCGTCG AGATATTTCG CCGGAGCTCC GACTAACTTA TTCTCTTTCC CTCTCTCAGT CAATAAGAAA TCATCTTCTC TGAGAATTAA AAGGATTCAA CAATTTCAAA GTACATTAGA AGATAGAATT AATCCACCTC TAGTATGTGG AAGAGTATCG CCTCGTCTTC GTGTTCCTGA TCATATACCA AAGCCTCAAT ATCTTGAGTC TAGCAAAGTA CCAATGATAT CAAGTGAGTT ACAGATTCCT GACTCTAATG GCATTGTGAA AATGAAGAAA GCGTGCAAGC TCGCGGCTGG TGTGTTAGAC TATGCAGGAA CTTTGGTTAG ACCGTTTGTT ACTACAGATG AAATTGACAA GGCAGTGCAT CAGATGGTTA TTGAGTCTGG TGCTTATCCT TCACCTCTTG GTTATGGTGG GTTTCCGAAA AGTGTTTGTA CATCGGTTAA TGAATGTATG TATCACGGGA TTCCCGATTC TCGTCCATTA CAGAATGGAG ATATAATAAA CATCGATGTC GCGGTTTACT TGGATGGATA TCATGGAGAT ACGTCAAAGA CTTTCTTATG TGGAGACGTC AATGAAAGCC TTAGACAACT TGTGAAGGTG ACAGAAGAAT GCTTGGAGAA AGGTATATCG GTTTGTAAAG ATGGAGCAAG CTTCAAACAA ATCGGGAAGA TAATCAGTGA GCATGCTGCA AAGTATGGCT ATAATATGGA GCGTTTCATC GGTCATGGTG TAGGAATGGT ATTACACTCG GAACCTCTTA TATATCTTCA TAGTAACTAT GATTATGAAC TTGAATATAT GATTGAAGGT CAAACTTTTA CGCTCGAACC AATTCTCACA ATTGGAACGA CCGAGTTTGT AATGTGGCCA GACAAATGGA CAATTGTGAC AGCAGATGGT GGTCCGGCCG CACAGTTTGA GCATACAATT CTTATTACCA CAACTGGTGC AGAAATTCTA ACCATTTCAT GA 
Length1032
Protein Sequence
Protein Residue
Map Locationscaffold_5: 2296377.. 2298175
Download Sequence
A.thaliana
AGI-codeAT3G25740.1
Descriptionmethionine aminopeptidase 1C
TAIR curator summaryEncodes a plastid localized methionine aminopeptidase. Formerly called MAP1C, now called MAP1B.
Alias[MAP1B][MAP1C][methionine aminopeptidase 1C][METHIONINE AMINOPEPTIDASE 1C]
Gene coexpression
MR
MR Locus Description
6.245 Ahg477119 Uncharacterized conserved protein (DUF2358)
10.583 Ahg939173 Bestrophin-like protein
24.3926 Ahg471952 ELF4-like 4
26.9258 Ahg950896 Pentatricopeptide repeat (PPR) superfamily protein
28.775 Ahg887362 NAD(P)H dehydrogenase 18
29.0517 Ahg359089 alpha/beta-Hydrolases superfamily protein
30.7896 Ahg476876 plant glycogenin-like starch initiation protein 2
31.749 Ahg923061 NC domain-containing protein-related
35.6931 Ahg952352
36.3318 Ahg480465 protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression