Detail



ID : Ahg950896

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950896|scaffold_802783.1
Sequence
TCTCACCCTG TTTAAGAACT GATGAATATT AACCGGAATA AACCAACGAG AGTATTGTAC CATTACGGAA CCAGCAGATT CGTACAATCT CTTGTCCAGA TGTTGAAGCA TCTGTTTCTC CAACATAGAA GAACTTCTTC AGCTTACTTC TACAAGTTTC AATTTTTCAC CTTTAGATTG TTCTCTCAGT CACCTTATCT GCCAAATTCA GCATCTTCGT TGCTCTCTTT GTCGTCGTCT TCTTCTTCGA GTCTGGCTGA AGCAATACTG AAATGCAGAT CAGCGGAAGA AGCGTTCAAG CTGTTCGAAA CGTCTTCGAT TTCTCGGCTC TCGAAGACAA CGGATCTCCA ATCTTTTTCA GCTGTAATTC ATGTTTTAAC CGGAGCTCAC AAGTATACGC TCGCCAGGTG TTTGATAAAA AGCCTCATAG AGCGTCTCAG GCGCTACAGT GAGCCGACTA ACATTTCTCA TAGACTTTTC AATGCTCTTG AAGATATTCA GAGTCCAAAA TTCAGTATCG GAGTGTTTAG TCTATTGATC ATGGAGTTTT TGGAGATGGG TTTGTTTGAA GATGCTCTTT GGGTGAGTCG AGAGATGAGA TGTTCACCGG ATTCGAAAGC TTGTCTTGCC ATTTTGAATG GATTGGTTAG AAGGAGAAGG TTTGATTCTG TCTGGGTTGA TTACCAACTT ATGATCTCTC GTGGGTTGGT CCCTGATGTC CACATTTACT CAGTTTTGTT TCAATGCTGT TTCAAGCAAG GTTTTCCCTC CAAGAAAGAG AAACTTCTTG ATGAAATGAC GTCGTTAGGG GTCAAGCCAA ATGTTTATAT CTATACCATA TATATCCGTG ATCTGTGTAG GGAAAATAAG ATGGAAGAAG CGGAGAAAAT GTTCGAGTTG ATGAAGAAAC ATGGTGTTGT TCCAAACTTG TATACTTACA GTGCAATGAT TGATGGTTAT TGTAAGACCG GTAACCTGAG ACAAGCTTAC GGCTTGTATA AGGAGATTCT TGTTGCTGAA TTGCTGCCAA ATGTTGTTGT TTTCGGCACA TTGGTCGATG GTTTTTGCAA AGCTCGCGAA TTGGTAGCTG CAAGAAGCCT TTTCGTGCAT ATGGTGAAGT TTGGGGTTGA TCCTAATTTA TATGTTTATA ACTGTTTAAT TCATGGACAG TGCAAATCAG GGAACATGTT GGAAGCAATG GGATTACTTT CTGAGATGGA AAGTTTGAAT CTTTCGCCTG ATGTATTCAC TTATACTATA CTTATCAACG GGCTATGTAC TGAAGAGCGG CTAGCAGAAG CAAATCGATT ATTTCAGAGG ATGAAGAATG AGAGAATTTT TCCGAGCTCT GTGACTTACA ATTCGCTGAT TCATGGGTTT TGTAAAGAGT ACAATATAGA GAAAGCTCTG GATTTGTGCT CTGAGATGAC ATCAAGTGGG GTAGAACTCA ACATCATAAC CTTTTCTACT TTGATCGACG GTTACTGCAA AGTGAGAAAC ATAAAAGCTG CAATGGGCTT GTACTTCGAG ATGACCATTA AAGGTATAGT TCCTGATGTT GTGACCTACA CAACTTTGAT TGATGCGCAT TTCAAGGAGG CCAACATGAA AGAAGCACTC AGACTGTACA GTGACATGCT AGAGGCTGGA ATTCACCCCA ATGATCACAC GTTCGCTTGC CTAGTAGATG GATTCTGGAA AGAAGGGCGA CTCTCTGATG CCATCGATTT TTATCTAGAA AACAATCAAG CTGCAACCGG TAAATCCATT TTCCAGAGGA GCTGCTGGAA ATATGTGGGG TTTACATGCT TGATTGAAGG GTTATGTCAG AACGGCTACA TTCTTAGAGG TAGCAGATTC TTCTCAGACA TGAGATCCGG CGGGGTAACC CCTGACATAT GGAGTTACGT ATCGATGTTA AAGGCCCACC TCCGAGAAAA GCGTATTACA GATACAATGA TGTTGCACTG TGACATGATC AAAACTGGGA TATTGCCAAA CCTTATGGTG AATCAATTGC TAGCCATGTT TTATCAAGAG AATGGATATC TAAGATCAGC TTGTTTCTTG ACCAATTCAA GTCGTTTGGG AACTATCTTC AAAAACACAT GTAACAGCAT ATTTCTTATT ACAGAGTTTC ATTGCAAAAT GTATGGAATC TGCATATCCT CAATTTACAA GACAATGGTA CAGAATAGTA TAGAGGAGCC TACTTTGTAG ATATATAGAT TGATTCTTAT G 
Length2241
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18784873.. 18787294
Download Sequence
A.thaliana
AGI-codeAT5G61400.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.94427 Ahg485109 P-loop containing nucleoside triphosphate hydrolases superfamily protein
11.1355 Ahg922803 Ribosomal protein S7p/S5e family protein
26.9258 Ahg322718 methionine aminopeptidase 1C
30.4959 Ahg472098 NDH dependent flow 6
31.8119 Ahg471373 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
32.45 Ahg496246 Transducin/WD40 repeat-like superfamily protein
32.8938 Ahg474212
52.2494 Ahg906318 RNAse THREE-like protein 3
56.6569 Ahg926407 inorganic carbon transport protein-related
57.55 Ahg949280 Protein of unknown function (DUF760)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression