Detail



ID : Ahg323027

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|323027|fgenesh1_pm.C_scaffold_5000571
Sequence
ATGGAGGGAA ATACTAACTG GAAGCCTAAT GAACAAGGCG GAGACTCCGC TGCGAATAAT GCTATTGATT GGAGATCACA ACATGAGCCT GAATTACGGA AAAAGGTTCT TTCAAAAATA GTGGAAAAGT TGAAGGAATA TTGTCCTACG CATGAAGAAT ATAAGATTAT AGACATTGCT TCCAAATTTG AGGAGAAGTT TTATAGCATA GCCAACGATA AGACTCCAAC AAGCCAACAA TGGTTACCAC AAAACACCCA GAGCAATCTC AACATTCCTG GGTCTTCTGG TTTGCCAAGT CAGGCCCCTA TAACCGTTTC AGGCGCTCAA AACCAACAAG TTCAGCCACC GCAGCAGCAG CATCATCCGC AAAGTCTGTT AAAACAACCT ATTCAGCAGT CCTTCCCTCA ATCTAGTTTA CCATCATCAA GCCAGCAAAC TTCTATGCAA CAAAACTCTC AATCACTGCC TAGACATCAG TTTCCGACAC AGCGGGTCAG TTCTAGTCAT CAACAACAGA TGGTTCTGCC GTCCCAGGAA CAGAAACGAC AAGAACAAGA GCAACTCATT AGTCAACTGA TGAATGTTAA GCAGAATCAT CCAACATCAC GACAAAACAA CGGAGCGCAA CAAGGATCTT TTCGGGTATC ATCGTCTCAA CAGAACAATA ACCTCCAAAA TATGCACCCG CAACGCCTTA ATAATGCTTC AGCCTTGCCC TTACAACAGC AGCAAAATAT GCCTCGAGGT CAACAAGTAG GACAATCTCA ACCAATGATG TCACAACAAT ACCGAGCGCA ACATCCCATG CAGCAGCTGC CTCAGAATAG AAGCTCACAG CAACATTTTG ATTCTGTACA GAACAATACC AATCGGTTTC AAGAAGGAAG TTCGTTGCGC CAAACCCAAA ACTTAACAGA CCAACAGAAC CAGCAACATC AATTACAGAG AGCACCTCTG GCAAATCCAT CTACATCTCA AGATTCTACA GGAAAGACGG TAAATGCCAA TGCCGGGGAC TGGCAGGAGG AGACTTATCA GAAGATAAAA CACCTGAAAG AGATGTATTT ACCTGTTCTG AGTCTAATGC TCCAAAGAGT TAAGGAAAAA TTGCGGCAGG TTGAATCTCT TCCGCCACAG AAGTTGCAAT CTCAGTCAAT TGAAAAGCTA AAGGCGGGAA AATCGTCAAT CGAACAACTT ATATTTTTCT TAAATGTTCA TAAGAGCACT GTATCAGAGA AGCATAGAGA CAAGTTTAGT CTATTTGAGA ACCACATATT GAAGTTTACC AAGAGCCAGA CCATGGTTCC GAGGCCAACG CAGCAGCAAC AAGGGCAATT TCCTCCTTCT CAGAGCCACC AAACGGCATT GCAATCCCAA AGTCCTCAAG TCCATGTGTC GCAGTCTCTT GATAGTGATC AAATGAGCTC GCGGCTGATG CCAATTAGCC AAAATGCGGC CTCGTCTTCG ATAATGCCTC ACTCGTTGCA GACAAGGCCT AAGCTGGAAC CAAGAGATGA GAACAACATT ATGGCTTCTT CAGGAAGTGT CATGTTACCT TCTGGTAAAC AGAATCAGCA GGCCGTACAA TCAAATATCA GTTTGGTTCA GTCGTTGCAG CAGCAGAAGC AATTCCATCA TCGCCAAATG CAACCACAAC AACAGTTACA ACAACCACAA CTAGCGAATC AGCAGCATCA AATACCGACA TCACAACAGA CAAATGAGAT GAATGATGTT AGGATGAGGC AGAGGGTCAA CATTAAAGCC GGGTTGCTTC AGCAACAAGT CTCATCGAGT CAGCGCCAGG TTCCAAAGCC ACAGTCTAAC GTTTCATCCC CTCAGATACA TCACCACTCT TCTCCTCAGT TAGTTGACCA GCAGATTCTT CCTGCGGTTA ACAAAACCAA AACTCCATTG ATGTCTGGTG GCTCGCCTTT TGTTGCTCCA TCTCCGATTC CCGGGGATCC TGAAATGCCT ATTTCTGTTG AGTCTCCAGT TTCTGGTGTT GAAATAAAAT CAACTTTAGA TTCTTCTTCT AAACTTGGCA CAGAGGAACA TCCTCCGTTA TCTGTTCCTC CCGAGCCAAT CACGGAGCGG CCTATTGATC GACTGATAAA AGCGTTTCAA GCAGCATCAC CAAAATCCTT GGCAGAATCT GTAAGTGAGA TTAGCGCGGT CATCAGTATG GTTGACAGGT TTGCAGGATC ATTCCATTCC GGTGGAGGAT CACGAGCTGG TTTAGGCGAA GATTTGAGTG AGAGGACAAG AAACTTTTCG ACACACGAAG AAACAAATCC GTCTAAAAGA ATGAAGCGCT CAGTCAGCAT TGTGCCGCGG GATATGTCAT CACAAATTGA TAGTTATGAA CAGTTCAGTA GCCTTGAATC TGAAGTCGAT TCCACAGCGT CATCTGGCTC AAAAGTTAAC AATATTGCGC CTGGTTGTGC CCTTTTGCAA GAAATCAAAG AAACAAACGG GAGACTTATA GAGACAGTGG TAGAGATATG CGATGAAGAT GCTACAGGAA CAATCGTGAC GTGTACTTAT GCTCCTGTGG CTCTCAGTGC TACCTTCAAA GATCATTACA AGTCAGGAAA AATAGTAAGT CTCTCCAAAC TTCTTCTTTT TCTCCCTATG TTCAGCTTTT TGATGTCTCC AATGTTTCAT GCAGTCACAG ATTCAACCGT TACGCTTACT AGTTCCTATG GATTATCCAT TAATGTACAC AAGTATGAGG ATCTATCGGC GAGAACCAGA TCAAGGTTCA GTTTGTCCAT GACGGAACTT TCAGAACCAG GGTCACTGAA AGAAATAGCT AAAACGTGGA ATGATTGTGC GAGAGCGACA ATGGTTGAGT ACGCAGAGCG ACATGGTGGA GGCACTTTCA GCTCCAAGTA CGGTGCTTGG GAAACTGTTC TAAGAGCTTC ATGA 
Length2934
Protein Sequence
Protein Residue
Map Locationscaffold_5: 5803177.. 5807802
Download Sequence
A.thaliana
AGI-codeAT2G10440.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.1803 Ahg887884 glutamate receptor 2.7
15.2315 Ahg493327 indole-3-acetate beta-D-glucosyltransferase
18.3848 Ahg900074 Protein of Unknown Function (DUF239)
21.0713 Ahg887308
32.0156 Ahg492857 VACUOLAR SORTING RECEPTOR 7
39.4208 Ahg476076 NAC-like, activated by AP3/PI
40.8412 Ahg475116 WRKY family transcription factor
40.9878 Ahg475091 Flavin-containing monooxygenase family protein
41.7852 Ahg345443 Peroxidase superfamily protein
43.359 Ahg929021 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression