Detail



ID : Ahg492857

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492857|fgenesh2_kg.7__2290__AT4G20110.1
Sequence
TAACAAAAGT CTAACATCTT CCAATTCTTT TCCATTTTCT AAAATATGTT TTGAGTGTGA TTTTTCTTTT TCGTATTTAT ATGAACTAGT ATGCTATCAT CTTCAATCAG AAACAGTTCC ACAGAAGTTT TCTGTTTTAT CTTTTCCTCT GTTTTTGATT TTTCTCTCTG AATCTCTCCT TCATTTTCCG GGGAAATAGT ACAAGAGAGG TTTTCAGTGA TGGGTTTAGT CAACGGGAGA GCTTCGTTGA CCTTTCTCCT CGCAACGTTG ACCATCATCG CGATGGTCGT TGACGCGAGG TTTGTGGTGG AGAAAGAAAG CATAAGCGTG CTAAATCCCG AGGAGATGAG GTCGAAGCGC GACGGTTCGA TAGCCAACTT CGGGTTACCC GATTACGGCG GGTTTCTAAT AGGGTCGGTG GTTTATCCGG ATAGTAAAAC CGATGGATGC TCTGCTTTTG GTAAAACCTT CAAGCCCAAG TTTCCTCGTC CCACTATTCT GCTTCTTGAT CGTGGAGGTT GTTACTTTGC CTTAAAAGCG TGGCACGCTC AGCAAGCAGG CGCCGCGGCA GTTCTTGTGG CGGATAATGT AGATGAGCCA TTGTTAACAA TGGATTCACC AGAGGAGAGC AAAGATGCAG ATGGGTTCAT AGAGAAGCTA ACAATCCCAT CGGTTTTAAT CGATAAATCG TTCGGAGATG ACTTAAGAAA AGGGTTTCAG AAAGGTAAAA ACATAGTCTT GAAACTAGAT TGGAGAGAAT CTGTGCCTCA TCCTGATCAG CGAGTAGAAT ATGAGCTGTG GACTAATAGC AACGACGAGT GTGGTGCACG GTGCGATGAA CAGATGGATT TTGTCAAGAA CTTTAAGGGT CATGCTCAGA TACTCGAAAA AGGCGGTTAT ACCGCGTTTA CGCCACATTA TATCACATGG TTTTGCCCTT TTCAGTTTAT AAACAGTCCA CATTGTAAGT CTCAGTGTAT AAACCATGGG AGGTATTGTG CTCCTGACCC TGAGAACAAT TTCAGAGAAG GTTATGAAGG CAAAGATGTT GTGCTTGAGA ATCTGAGACA GCTTTGTGTG CATAGAGTTG CGAATGAGAG TAGCCGGCCT TGGGTTTGGT GGGATTATGT TACCGATTTT CATTCGCGAT GTTCGATGAA GGAGAAGAAA TTTAGCATAG AATGTGCTGA GAGCATCATC AAATCTATGA ATTTACCTAT TGAGAAGATC AAGAAATGCA TTGGTGATCC TGAGGCTGAT ACTGAGAACC AAGTTCTGAG AATCGAGCAA GTATCCCAGA TTGGCCGAGG TAACCGGGGA GATGTTACGA TATTGCCAAC ATTAGTCATC AATAACGCCC AATATCGAGG GAGATTGGAG AGAACCGCTG TTCTAAAGGC GATATGCGCT GGATTCAACG AAACATCGGA ACCTCCCATT TGCTTAAACA CAGGTTTAGA GACAAATGAG TGCCTTGAAA ACAATGGTGG TTGCTGGCAG GACACAAAAG CAAACATAAC CGCTTGTCAA GACACATTCA GAGGACGACT CTGCGAGTGT CCGGTTGTAA AAGGTGTTCA ATATAAAGGC GACGGGTACA CTTCATGTAC ACCTTATGGG CCTGCCAGGT GTACTATTAA CAATGGAGGT TGCTGGTCTG ACACAAGAAA TGGCTTAACT TTCTCTGCTT GCTCAGACTC TGTGTCTACT GGCTGCAAAT GTCCTGAAGG TTTCCAAGGC GACGGTTTCA CGTGTGAAGA TATTAACGAA TGTAAAGAGC GTTCGGTGTG TCAATGTAGC GGTTGCAGAT GCAAGAACTC ATGGGGTGGA TACAAATGCA GTTGTTCTGG CGACAAGCTT TACATAAACG ATCAAGATAC TTGTATAGAG AGATATGGAT CCAAAACAGC ATGGTGGCTC ACACTCTTGA TCCTAGCTAT CGTCGCAGTA GCCGGTTTAG CTGGTTATCT ATTCTACAAA TACCGGTTCA GGTCTTACAT GGACTCGGAG ATTATGACCA TCATGTCACA GTATATGCCA CTTGAGAGCC AAAGAGCTCG TGAAGTTCCA TCAGAAGCTG AGCCTTTTAC ACTCTAAACT AATATTATAT GACCAAAGTA ACCAAAACTT TCCTACACAA AGAAATGTTT GAGATCAATT AATGTACATA TAAACTATAC TGTAAAAATA AAAGAGTGAG ATAGAGTTGT GTATATTCAT GGCAAAAAAG ATGTAAAGAA ACTTTTCAAG AAAATAAAAC AAAAATTGCT TTC 
Length2273
Protein Sequence
Protein Residue
Map Locationscaffold_7: 9120647.. 9124216
Download Sequence
A.thaliana
AGI-codeAT4G20110.2
DescriptionVACUOLAR SORTING RECEPTOR 7
TAIR curator summary
Alias[BP80-3;1][VSR3;1][VSR7][binding protein of 80 kDa 3;1][VACUOLAR SORTING RECEPTOR 3;1][VACUOLAR SORTING RECEPTOR 7]
Gene coexpression
MR
MR Locus Description
1 Ahg900074 Protein of Unknown Function (DUF239)
2 Ahg887308
2.44949 Ahg935611 cyclic nucleotide gated channel 3
2.82843 Ahg918888 Chitinase family protein
3.74166 Ahg475283 galactinol synthase 4
4.58258 Ahg933857 protein kinase family protein
5.47723 Ahg910885 protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding
6.48074 Ahg495950 with no lysine (K) kinase 4
6.78233 Ahg341304 plant U-box 24
8 Ahg336505 leucine-rich repeat transmembrane protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression