Detail



ID : Ahg323914

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|323914|fgenesh1_pm.C_scaffold_5001458
Sequence
ATGGCTGATG GTGAAGACAT TCAACCCCTT GTCTGTGACA ACGGAACTGG AATGGTTAAG GCTGGTTTTG CTGGGGATGA TGCACCGAGG GCTGTGTTTC CAAGTATTGT TGGCCGTCCT CGCCACACTG GAGTGATGGT TGGAATGGGA CAGAAGGATG CATATGTTGG CGATGAAGCT CAATCCAAGC GTGGTATTCT AACCCTTAAA TACCCAATTG AGCACGGTAT TGTCAACAAT TGGGATGATA TGGAAAAAAT ATGGCATCAT ACTTTCTACA ATGAGCTCCG TGTTGCTCCT GAGGAGCATC CCATTTTACT CACTGAAGCA CCTCTTAACC CAAAGGCTAA CCGTGAGAAG ATGACTCAGA TCATGTTTGA AACCTTTAAT GCTCCTGCCA TGTATGTCGC CATTCAAGCT GTCCTGTCAC TTTATGCTAG TGGCCGTACT ACGGGTATTG TGCTCGACTC TGGAGATGGT GTGAGTCACA CGGTCCCTAT CTATGAGGGT TACGCTCTTC CGCATGCCAT CCTACGTCTT GATCTTGCAG GTCGTGACCT GACAGATGCT CTGATGAAGA TCCTCACTGA GCGTGGTTAC TCTTTCACCA CAACAGCTGA GCGTGAAATT GTCAGAGACA TCAAGGAGAA GCTTTGCTAC ATTGCCCTTG ACTACGAGCA GGAGCTTGAG ACGGCTAAAA CCAGCTCTGC TGTTGAGAAG AACTATGAGT TACCTGATGG GCAAGTGATC ACCATTGGAT CTGAGCGTTT CCGTTGCCCA GAGGTTCTTT ACCAGCCATC TATGATCGGT ATGGAGAATG CTGGTATCCA TGAAACCACC TACAACTCCA TAATGAAATG TGATGTTGAC ATCAGAAAGG ACTTGTATGG TAACATTGTG CTCAGTGGTG GAACAACTAT GTTCCCTGGA ATTGCTGACA GAATGAGCAA AGAGATCACT GCTTTGGCAC CGAGCAGCAT GAAGATCAAA GTCGTTGCAC CGCCGGAGAG GAAATACTCT GTCTGGATTG GAGGATCCAT CTTGGCCTCC CTCAGTACCT TCCAGCAGAA TATGATGAGT CAGGCCCGTC GATTGTTCAC CGGAAATGCT TTTGAGTTTG AAGTTAAGTC TGCTTCCGGA GAAGCCCTGG GGGTTTTCCA ATTTATCCTT ACTGGGTTTT TATCTTCGTT CTCTGCTGTT CTTTGTTTTT GTTCTTCAAT ATTTTCAGAT TCTGGCCTAA GACATATTGA AGAACTCACA TTATCTGTTT GTAGTTGTGG TTAA 
Length1284
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15805798.. 15807481
Download Sequence
A.thaliana
AGI-codeAT3G53750.1
Descriptionactin 3
TAIR curator summaryMember of the Actin gene family. Expressed in mature pollen.
Alias[ACT3][actin 3]
Gene coexpression
MR
MR Locus Description
12.9615 Ahg475305 Adaptor protein complex AP-1, gamma subunit
16.1864 Ahg921505 Leucine-rich repeat protein kinase family protein
17.2047 Ahg491000 beta-galactosidase 3
33.0151 Ahg495659 FASCICLIN-like arabinogalactan 1
33.4664 Ahg331870 Actin binding Calponin homology (CH) domain-containing protein
38.8844 Ahg476635 fatty acid biosynthesis 1
40.3609 Ahg490817 elicitor-activated gene 3-1
40.9878 Ahg932956 3-ketoacyl-CoA synthase 11
42.1426 Ahg479405 NAD(P)-binding Rossmann-fold superfamily protein
46.8295 Ahg486237 Leucine-rich repeat protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression