Detail



ID : Ahg932956

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|932956|scaffold_400944.1
Sequence
TTTGTCAAAG CAGGGAAAGC TATGGATGTT GAGCATAAGA AGCCGTTGAT CGAATCATCG GATCGTAACC TTCCTGATTT CAAAAAATCA GTGAAGCTTA AGTATGTGAA GCTTGGTTAC CATTACCTTA TCACACATGG AATGTACCTC TTCCTCTCCC CATTGGTGCT TGTGATCGCT GCGCAGATTT CGACATTCTC TATCAGCGAT ATTCGCAACC TCTGGGAGCA TCTTCAGTAC AATCTTATCT CAGTGATTGT TTGTTCTATG CTTCTTGTGT TTTTAATGAC TATTTACTTC ATGACTCGGC CGCGTCCTGT GTACTTGGTG GACTTCTCGT GCTTTAAACC CGATGAGTCC CGTAAATGCA CTAAAAAGAT CTTTATGGAT CGTTCTAAAC TCACTGGTTC TTTCACAGAG GAGAATCTTG AGTTCCAGCG CAAGATTCTA CAACGTTCGG GGCTTGGTGA ATCTACTTAT TTACCTGAGG CTGTTCTCAA TGTTCCTCCT AACCCGTGTA TGAAAGAAGC TCGAAAAGAG GCGGAGACTG TGATGTTTGG AGCTATTGAT GAACTTCTTG CCAAGACGAA TGTCAACCCG AAGGATATTG GGATCTTGAT TGTTAATTGT AGTTTGTTCA ACCCGACACC TTCGTTATCT GCTATGGTTG TTAATCACTA TAAGCTCCGT GGGAACATAC TCAGTTACAA CTTGGGAGGA ATGGGTTGCA GTGCTGGTTT GATCTCAGTT GATCTTGCTA AACATCTTCT TCACTCCATT CCTAACACTT ATGCAATGGT GATTAGCATG GAGAATATTA CATTGAACTG GTATTTCGGG AATGACCGCT CGAAGCTTGT TTCCAATTGT CTTTTTAGAA TGGGAGGTGC AGCGATTCTT CTCTCTAACA AACGATGGGA CAGAAGAAGA TCGAAATACG AGCTTGTTGA TACGGTTAGA ACCCACAAGG GAGCTGATGA TAAGTGCTTT GGTTGCATAA CTCAAGAAGA GGATTCCGCA AGTAAGATTG GTGTTACCCT GTCGAAAGAA CTAATGGCTG TTGCTGGTGA TGCTCTAAAG ACAAACATCA CAACGTTAGG ACCACTGGTT CTGCCGACAT CTGAACAGCT TCTATTCTTT GCAACATTAG TGGGACGAAA ACTCTTCAAG ATGAAGATCA AGCCATACAT CCCAGACTTC AAACTAGCGT TTGAGCATTT CTGCATCCAC GCGGGAGGAA GAGCTGTTCT TGATGAATTG GAGAAGAACT TGAAACTCAC AGATTGGCAC ATGGAACCAT CAAGAATGAC ACTCTACCGT TTTGGTAACA CATCCAGTTC TTCTTTGTGG TATGAATTAG CATATAGTGA GGCAAAAGGA AGGATCAAGA AAGGCGATAG AATTTGGCAG ATAGCTTTTG GTTCTGGTTT CAAGTGCAAC AGCTCAGTTT GGCGAGCGGT AAGGTCAGTC AACCCTAAAA AAGAGAAGAA CCCGTGGATG GATGAAATTC ATGAGTTCCC AGTTGATGTC CCCAAGGTCT CAACAATCTA GAAACCATCA GCAATTTTTC A 
Length1571
Protein Sequence
Protein Residue
Map Locationscaffold_4: 9445048.. 9446618
Download Sequence
A.thaliana
AGI-codeAT2G26640.1
Description3-ketoacyl-CoA synthase 11
TAIR curator summaryEncodes KCS11, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).
Alias[KCS11][3-ketoacyl-CoA synthase 11]
Gene coexpression
MR
MR Locus Description
13.0767 Ahg481271 heptahelical protein 3
13.6382 Ahg485285 IQ-domain 21
21.7025 Ahg945946 SKU5 similar 4
22.2711 Ahg495659 FASCICLIN-like arabinogalactan 1
23.6643 Ahg497154 FASCICLIN-like arabinogalactan 2
24.8596 Ahg480276 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
29.6985 Ahg486683 Eukaryotic aspartyl protease family protein
31.273 Ahg471359 extensin-like protein
33.8231 Ahg480107 FASCICLIN-like arabinoogalactan 7
40.9878 Ahg323914 actin 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression