Detail



ID : Ahg324227

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|324227|fgenesh1_pm.C_scaffold_5001771
Sequence
ATGAAGAGAA AATGTAGGAT TTGGTTGCAT AAGCAGCTCG CATCAACTGA TGATTTGAGT CACAGTCTAT TGTTTGGGTG GTTCGTTTGC CAGTCCTCTT CTTGTCTTGA CGTTGTTGTG GCCTTTATCT CTGATGAAAG CTCCTTGTCC AATGCCGGAT CTAAGCTCCA AGACGTACTC CGTGAAACAA ATGAGAAGAT GCCCTCAACT TTACGGGATA AGGCAGCGTT TACTCTCCTT GGTCGTTATG ATACAAGCCG TAATGCTAAT GGAAACGTAT CAAAGATTAT AACAGACAAA GATATGTGCA GCAAGGCTGG AGCTTATTGC AAATATAGTG GCCTCAGCTG TGGTTGTCAA AGGAGCATAG AATTATGGAA CTCCATTCAA GTTCAAGATT GCATCATATA CACTGGAATG GGGAGATTGT ATCTCAATGC GATGTCCACG TATGTCATAG TCTATGACAC TCCAGTGTTT GGTTCTCACC ATTTCTCGTT AAGCTTTTGG AATTCTTCTC CTCAGACAAA AGCTCCTCTT AAGAAACCCA AGTGGGTTGA TGATCTTCAC AACAGGAAAC CTCTGAATGA AATGGAAACT GTGATTCTTT CCATAAATTG CGCCTCAGCT GCCAAGATTG CCTATAAGAA GATTTCCACG CAGCTGGAGA CTTCTTCTCA GAACTTTTCC ATTTGTTACT TGATATCTTC TTTGACATGG CGGTTACTCG CCACAATTTT AGGCTCTATA TCAAGTCTGT ATTATAGCCT TGCCCAATTC TTCTATTTAC TTTCAAGTTT TCCGATTTTC TCATGGGTGC ACATCGCATC GAGGAGGGTA CTCAAGAATA CATGGATCAA CTTCAGAATA CGCAGTTGTC AGATCTTATA TTGGCCAATC TTCCTTGAAG AGAATGGTAT GATGTCCATT TCCTGTGTGG AACATGCAGA GAAAGCTGCA CTGCAAAGAC ATTCTACATG GTCGGCCATG GCTGTTGATC TTGTTTTGGG GAATTTGATT GGTCTAGGTC TACTGTTTAA CACCGAATCT GTCTGCTCAT TTGTATTCGA CTTTGCAAAG GAGTTTACGA ATGGTATTTT GCGGTCTGGT AGTGTGTGGT TGATGGGAGT TCCAGCGGGT TTTAAGTTAA ACACAGAATT GGCTGGAGTT TTAGGCATGG TATCTCTTAA TGTAATCCAG ATATGGTCTA CTCTCTGGGT CTTCATGGCT TCTTTCATCT TTTATTTGAT AAGAGTAATT GCTATCCTTG GAATTACTTT TGGTGCCACA GTATCTGCCG CATTTGTCAT AGATGTTATT ACTTTTGCAA CACTTCATAT AATGGCTCTT CACTGGGGAA TCACACTTGT ATATTCTCAC CAAATTCAAG CTTTAGCAGC TTTGTGGAGG CTTTTCAGAG GGCGAAAATT GAATCCTCTA CGTCAAAGGA TGGACAGCTA TGGTTACACT GTGAAGCAAC ATGTAGTGGG ATCTCTTCTG TTCACTCCTC TTCTGCTTCT CTTGCCAACA ACATCAGTTT TCTACATCTT TTTCACCATT ACGAGCACTA CAATCAACTC CATATGTATG TTGATTGAAT TTGCCATCTC CGTCATCCAT GCAACACCAT ATGCAGAGGT TTTGATTTGG CTTGTCAGGC GTAAAAGATT CCCTTGTGGT GTTTGGTTTG AAATGGAACA CTATAGAGAG CATATCCTCG AAGATGCAGA CTCCAAAAGT CTACTAGAAG AACATGATAC TCCTGATCTA ATAGTTTCCA ACCTTCGCAG CAATTTTTTA ACCTTAGGAC AGATTCTTTT GCCTCACTAT ACAACAATAT TTTCAGGAAT ATCAGCTTCT TCTCTGACAA CATCAGCTCG GGGAGTCCTC AGTGGGAAAA GAATGCCATC AAAACTGGGG CTTGATCTTC CTCCTCCAAG GCCATGGATG CACATGCCAT TGAGACAGTA CTGGATCCTA TGCCATAATT CCATCATCTC ATCAGTGGCA AATGGTGAAT TCTCCAATTG A 
Length2031
Protein Sequence
Protein Residue
Map Locationscaffold_5: 17280937.. 17284043
Download Sequence
A.thaliana
AGI-codeAT3G57170.1
DescriptionN-acetylglucosaminyl transferase component family protein / Gpi1 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
18.0278 Ahg326105 DNA repair protein Rad4 family
19.2354 Ahg479519 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related
33.4066 Ahg940612 1-deoxy-D-xylulose 5-phosphate synthase 3
36.3318 Ahg492840 Peptidase M50 family protein
38.3667 Ahg490689
40.398 Ahg339800 Tetratricopeptide repeat (TPR)-like superfamily protein
42.19 Ahg897581 cytidine/deoxycytidylate deaminase family protein
46.744 Ahg935453 GATA transcription factor 2
57.6888 Ahg496675 Transducin/WD40 repeat-like superfamily protein
62.546 Ahg314370 AP2/B3-like transcriptional factor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression