| Annotation |
|---|
| Description | jgi|Araly1|479519|fgenesh2_kg.3__2220__AT3G20010.1 |
| Sequence |
ATGGAGTCTG CTATTGAAAT TAGTTCAGGT AGTGATAGTG ATGACGAACT ACCACAGCCC ATTAGGCCAC AAATTCGAAC CAGGACAGAT CCCATATGGC TAGGTATAGA GATTGTGCCT ACAGTGGATA GCCATGCTAG AGCTGAACAT ACATATCAGG CTTCTCGCAA TGGTGCCTCG AATGATACTT CTCGGCCTGG AGTCTCTAAG CCTTTTACAG GGAATGGGAA CACTGTAAAC TCGAGAATTT CCAGTGGATC TGGTGCTGAT TATGAGAGAC TATCGTCTGA GCAAGCTCTG AAAAGAACTC TTCCACCCTC CTTTAGTTCG CCTCCCTTTC CTTCCAGAAG TGGCGCTAAC AATATAAGTA ATGCTAGTGG GAGTCGCGTT GGTGCGGATT ATGAGAGACT ATCGTCTCAG CAAGCTCCGA AAAGAACTCT TCCGCCCTCT TTTAATCCCC CTCCCCTTCC TTCCAGAAGT GGCACTAACA ATATAAGTAA TGCCAGTGGG AGTCGCTTTG GTGCGGATTA TAGTCGTCCA GCTGTGTCAG CTGTAGGCAA CAAGAGTACC TTTGGTGATC ATTATAGTGG AGCCCATGCT GAGATAGGAA TTCAACGTGG CATGAATGGG GTTAGGATCC TGCCTCCATC TCTGACGCAT GGAACATCTG CTTCTGTTTT GCATCATGCT GGTTCAAGTG ATCCAATGCA CAGGTTTGGT ATTGGTGAAG ATAGGAATCC TGATAACGAT GAGAGGTTGG TTTATCAGGC TGCACTACAG GATTTGAATC AACCCATTAC CGAAAGCGAT CTACCTCCTG GTGTTCTTTC AGTTCCTCTT ATGAGGCATC AGAAAATTGC ATTGGCATGG ATGTTTCAGA AGGAAACAAG AAGTTTTAAC TGTGCGGGAG GAATACTAGC AGATGATCAG GGACTTGGTA AGACGGTCTC GACGATTGCT CTTATCCTAA AGCAAAAGAT TGTGTCACTA CTGAAGTCTG CAAATTCATG CAAGCAAGAA ACTGAGGCAT TAGTCCTGGA TGCTGATGAT GAGTCAGACA ATGCAAAGCA TGAAAGTGGT AGTCATGTAA AACCAGAGCT CAAGGTTTCA AGCAACAGTG AGACCTCGGT TCTGAGTGCT AGTGGTAATG ATGAGAATGA CAGTTCAGAT ATGGAGAAAG CCAAAGATGA AGAAGCAAAT TCTTCAACAC GAGCATTTAA GTGGAAGAGA CCAGCTGCTG GTACATTAAT TGTTTGCCCA GCGAGTGTTG TACGGCAGTG GGCAAGAGAG CTTGATGAGA AGGTTTCTGA AGAATGGAAA CTTTCTGTGT TAGTCTACCA TGGTAGTAAT AGGACCAAAG ATCCTAATGA ATTAGCAGAA TACGATGTGG TTGTGACAAC TTACGCTATT GTTACTAATG AAGCTCCCAA AAAATTCTTG GTGGATGAGG ATGAGAACGA TGAAAAAAGT ACTGACAAAT ATGGTCTTGC CTCTGGCTTC TCCAACAATA AGAAGCGGAA AGTCGCGGTG GGTGCCAGTA AGAAGAGTAA AAAAAGAGGT AGAAAAAGCA CTGACAATTC TTCTTCTGAG CCCGATTGTG GTGCTCTAGG AAAAGTTGGG TGGTTCAGAA TAGTACTAGA TGAAGCTCAG ACAATAAAGA ACCATAGAAC ACAAGTGGCA AGATCCTGTT GCACTCTTCG AGCCAAAAGG AGGTGGTGCT TGTCTGGAAC ACCAATACAA AATACGATTG ATGATTTATA TAGCTATTTC AGGTTTCTTA GATATGATCC ATATGCGGCG TACAAGTCAT TTTACAGTAC AATCAAGGTT CCAATTTCCA GAAATTCTTG TCAAGGTTAC AAGAAGCTTC AAGCTGTTCT AAGGGCTATA ATGCTGCGCC GCACCAAAGG AACATTACTT GATGGGAAAC CCATTATTAA TCTACCTCCA AAAAAAGTTA ATTTGAGCAC GGTAGATTTT TCAGTGGAAG AGCGCTCTTT CTACAGGAAG CTTGAAGCGG ATTCACGTTC ACAGTTCAAG GCCTATGCTG ATGCGGGAAC TTTGAGTCAA AACTACGCAA ATATTCTTCT GATGCTTTTG CGACTCCGCC AAGCTTGTGA CCACCCACAA CTTGTTAAAG TATATAACTC AGATCCTGTT GGAAAAGAAT CAGAAGCAGC AGTTAGAAGA CTCCCTAGGG AGGCTCGAAG CAGACTGATC AATCGCTTAG AGTTATCATC TGCCATCTGC TATGAGTGCA ATGAGCCACC AGAAAAACCT GTTGTTAAGT TGTGTGGCCA TGTATTTTGC TATGAATGTG TTTTAGAATA CATAACTGGG GATGAGAACA CGTGCCCTGT ACCGAGATGC AAACAACAGC TTGCGCGTGA TGTTGTTTTC TCTGAATCTT CGCTTAGAAA TTGCATTTCT GATGATTTGG GCTGTAGTTC CTCGCATGAT AAAGGTCTCG ATAGATCGGT TTTTGAAAAA AGCGAGTTTT GTTCATCAAA AATCAAAGCT GTCCTCGATA TCCTGCAGTC GCTTTCCAAA CAAGACACTC CAAACTCAGC TCAGCATGGT CAAATGCCAT CTTCCTCACG GCCGTATGAT GACGATGATG TTACCATTGT AGAGCCAAAG CGTCTTCACT CATCTTCACC TAGCCAGGGG GCAGTAAAAA CGATAATATT TTCTCAGTGG ACTGGTATGC TTGACTTGGT TGAGCTGCGT ATTCTTGAAA GTGGTATTGA ATTCAGAAGA TTAGATGGCA CAATGAGTCT AGCAGCAAGA GACAGGGCGG TAAAAGAATT CAGTAAAAAT CCAGATGTAA AGGTGATGCT GATGTCTCTA AAAGCTGGAA ACCTTGGGCT GAATATGGTA GCTGCATGTC ATGTTATTCT CTTGGATCTT TGGTGGAATC CAACTACCGA AGATCAGGCG ATTGATCGTG CACATCGTAT TGGACAAACT CGGCCAGTTA CTGTAACTCG CATTACTATA AAAGACACCG TTGAGGATAG AATTTTGACG CTTCAGGAAG ATAAAAGGAC AATGGTTGCA TCTGCCTTTG GTGAAGAACA TGGTGGAAGC TCTGCAACAC GTCTAACAGT AGACGATCTC AAATATCTGT TTATGTTGTA GACTACTCGT TGTCTGGTCT ACGCGTAGCC TTCTAATCGC CTCTTGAACT AGGTTGCTTA GTACAGTATA TATGGGAGAT TAAGCCCAGA ATTTTGATCA GGAAGAAACC TCTAGCTGCT TTTGTAATGA ATTTCCAATA CTGTGGCTAT CTTTTGGTTT TGTGAGGTTT GAACCCAGTC TATGCATTTT TGTGTGCATT GATTGGAAAC AGGCCATATG TAAATAACTA AAATCGGTTC ATGGT |
| Length | 3385 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 8237553.. 8242800 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G20010.1 |
| Description | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6 |
Ahg475928 | |
| 10.7703 |
Ahg898458 | Cleavage and polyadenylation specificity factor (CPSF) A subunit protein |
| 12.0416 |
Ahg480460 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 12.49 |
Ahg490904 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 14.8997 |
Ahg324014 | Transmembrane amino acid transporter family protein |
| 16.6132 |
Ahg496942 | DA1-related protein 7 |
| 17.4642 |
Ahg496818 | Pentatricopeptide repeat (PPR) superfamily protein |
| 19.2354 |
Ahg324227 | N-acetylglucosaminyl transferase component family protein / Gpi1 family protein |
| 20.0499 |
Ahg473269 | cation-chloride co-transporter 1 |
| 21.8174 |
Ahg347545 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|