Detail



ID : Ahg325121

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|325121|fgenesh1_pm.C_scaffold_6000341
Sequence
ATGAAGAGAA TCTTTGGTGC GAAGAATAAC AAAGAGCCTC CACCTTCTAT TCAGGATGCC TCTGATCGGA TCAATAAAAG AGGAGAGTCA GTGGAAGATA AAGTTAAGAG GCTTGATGCT GAGCTCTGCA AATACAAAGA TCAGATCAAA AGGACTAGAC CTGGTCCTGC TCAAGAAGCT ATCAAAGCTC GTGCTATGAG AGTCCTCAAG CAAAAGAAGA TGTACGAAGG ACAACGTGAC ATGCTCTATA ATCAGACTTT TAACCTTGAT CAAGTTTCAT TTGCTGCTGA AAGCCTTAAA GATGCTCAAC AAACTATGAC AGCGCTAAAA TCTGCTAACA AGGAGTTGAA AGGAATGATG AAAACCGTCA AGATTCAAGA TATAGATAAT TTGCAAGATG ATATGATGGA CTTAATGGAT GAGAGTTCTG AAATTCAAGA GACACTCGGT AGGAGCTATA ATGTTCCTGA TGACATTGAC GAAGATGACC TCTTGGGCGA GCTTGATGCT CTTGAAGCTG ACATGGGAAA CGAGACTGAA GCAGACGGAG TGCCTTCCTA TCTCCAACCC GATAAGGAAC CGGATCTTAA TGATGAACTG AACTTGCCTC CAGCACCAAT GGGGCATACA GGAGCACCAC CCGGACGAGC TCAGGCTGAG GATGAATGGG GATTACCAGC GGTACCACGT GCATCACTTC GGGGCTAA 
Length708
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1615740.. 1617283
Download Sequence
A.thaliana
AGI-codeAT5G04850.2
DescriptionSNF7 family protein
TAIR curator summary
Alias[VPS60.2]
Gene coexpression
MR
MR Locus Description
27.6406 Ahg494627 Pseudouridine synthase/archaeosine transglycosylase-like family protein
36.9188 Ahg944253 Protein of unknown function (DUF726)
40.3485 Ahg482122 cofactor of nitrate reductase and xanthine dehydrogenase 2
41.1339 Ahg943129 Copper amine oxidase family protein
43.8178 Ahg473072 vascular plant one zinc finger protein
46.3033 Ahg478924 Class I glutamine amidotransferase-like superfamily protein
46.4758 Ahg337666 cellulose synthase like E1
48.621 Ahg329762 Protein of unknown function (DUF581)
49.9199 Ahg478095 CONSTANS-like 9
59.4643 Ahg946143 Protein of unknown function (DUF1639)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression