| Annotation |
|---|
| Description | jgi|Araly1|478095|fgenesh2_kg.3__796__AT3G07650.3 |
| Sequence |
AGAAGCACAA GAAGAAGAAG AAGAAGAAGT TCTGGAATAA TTATCGTCTC TGTTTCTAGG GTTTGTTTAT TTCTCTCTAA AGTTTCTGGA TTCAACTTCT GAAGAAGATC TTTTTATTTA TTAACTTTTT TGGACAGCAG AAAGTTTATT TGGTCAGAGT GAAGGAAGAT GGGTTACATG TGTGACTTCT GTAGTGAACA AAGATCTATG GTGTACTGTC GATCCGATGC AGCTTGTCTG TGTCTCTCCT GTGACCGGAG TGTTCATTCT GCTAATGCAT TGTCCAAACG ACATTCTCGG ACACTTGTCT GCGAGAGATG CAATGCTCAG CCTGCTACAG TCAGATGTGT TGAAGAAAGG GTCTCACTCT GTCAAAACTG TGACTGGTCT GGCCACAACA ACAATTCTTC TTCTTCTTCT ACTTCGCCGC AGCAGCATAA GAGGCAAACC ATAAGTTGCT ATTCGGGTTG CCCTTCGAGC TCAGAACTAG CCTCCATTTG GTCCTTCTGT TTGGACTTAG CCGGACAATC CATTTGTGAA CAAGAAATGG GTATGATGAA TATAGACGAT GATGGTCCTA CCGACAACAA AAATTGTAAT GAGGATAAGA AAGATGTCTT TGTTTCAATT CCTGAAACCA GTTCTGCAGC ACAAGGAAAG TCATCTTCTG CTAAGGATGT TGGAGTCTGT GAAGATGACT TCTACGGGAA CCTTGGTATG GATGAAGTTG ACATGGCACT TGAGAACTAT GAAGAGCTCT TTGGTACCGC CTTTAACCCC TCGGAAGAGC TATTTGGGCA TGGTGGAATC GATAGTCTTT TCCAGAAGCA CCAAACAAAA GCTCCAGAGG GAGGGAATTC GGTGCATCCA GCTGGCAGTA ATGATTCGTT CATGAGTTCG AAAACTGAGC CAATAATTTG CTACACATCG AAGCCAGCAC ATTCGAACAT ATCGTTCTCT GGAGTCACTG GAGAAAGTAG TGCTGGAGAT TTCCAAGAAT GTGGTGCATC ATCTTCGATA CAGCTCTCGG GCGAGCCACC ATGGTATCCT CCAACATCTC AAGAAAATAA TGCCTGCTCA CATTCAGTAA CCCGTAATAA CGCAGTTATG CGATACAAGG AAAAGAAGAA GGCTCGCAAG TTTGATAAGA GAGTGAGGTA TGCTTCTCGC AAAGCAAGAG CTGATGTGAG ACGGCGTGTA AAGGGGAGAT TTGTCAAAGC TGGTGAAGCT TATGATTACG ACCCCCTCAC CCCAACCAGA AGCTATTGAG GAGTCTAATT GAAAGGTAAA AAAAAGGTAG ATACACATGG CGAAGAATCG AACAAGAAAG GTTTTTGACT TATGGGTAGT TTCAAGTGAG CAACTTGGAA AATTGTGGGT TAGTAACAAA ACAAGACTAC TCTAGCATGA ACAGATTCAA GACTGACTCT TGCGTCTCAC TGATCAGGGT TCCATGAATT TTGTTCTTCT CTGTAGTTAA AAAGGCAGGG AGATTTAGAG TAATTAAACA ATATGTGATT GTTGTGTATG CCTTTCTATT TGTTTGTTGT ATACTCATAA ATGCTTTTTT CTGTTTTGTA CTCGGGCATT CTTGTAAATT AAAAACATTA TCCACATTTG TAACAACCGA CTAGTTCAAG TTTAAGGAGA TTTTGGTTTG TAGCAACTTC AAGAGGTTGA TCCAACAATG AGACAATGCC AAA |
| Length | 1703 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 3020535.. 3023350 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G07650.1 |
| Description | CONSTANS-like 9 |
| TAIR curator summary | This gene belongs to the CO (CONSTANS) gene family. This gene family is divided in three subgroups: groups III, to which COL9 belongs, is characterised by one B-box (supposed to regulate protein-protein interactions) and a second diverged zinc finger. COL9 downregulates expression of CO (CONSTANS) as well as FT and SOC1 which are known regulatory targets of CO. |
| Alias | [BBX7][COL9][B-box domain protein 7][CONSTANS-like 9] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.47723 |
Ahg319530 | maternal effect embryo arrest 14 |
| 5.65685 |
Ahg491275 | |
| 6.245 |
Ahg471880 | |
| 6.48074 |
Ahg355042 | pleckstrin homology (PH) domain-containing protein |
| 9.79796 |
Ahg479607 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| 10 |
Ahg952367 | SPFH/Band 7/PHB domain-containing membrane-associated protein family |
| 10.198 |
Ahg470445 | coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family |
| 10.7703 |
Ahg487947 | vesicle-associated membrane protein 713 |
| 12.8062 |
Ahg356828 | cold regulated gene 27 |
| 13.4907 |
Ahg939605 | expansin A9 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|