| Annotation |
|---|
| Description | jgi|Araly1|325218|fgenesh1_pm.C_scaffold_6000438 |
| Sequence |
ATGGAGAATT TAGTGAAGAG CTGCGCAGGG ATCGAGAAGA AAAGAAGCAA TTTGACTCAT TCGGAGGAAG ATATGGTAAC AGAGTCAAAG GAGAGAAGCA GCACGAGCGA ATCTAGCTAC GAGGGTTCCT CCGGCACCAC CGTCGCTTCG TCTTCTCCAC CACCACAACC GTCGCAGATT CTGGGTTGGC CGATCAGAAA AGCTTCATTT CGTAAGAATT CCAAGGAGAA TGTTAATTTG GATCATAAGA AATCTACCCT TCACGATGAT TCTGGGTTTC AAGGAAAAGA GATGAATTTT GCAGACGTGG ATATGATGAA GGAGAGATTT GCAAAGTTGT TGCTTGGTGA AGATATGTCA GGTTCTGGTA AAGGTGTGTG TACAGCTTTA GCCATCTCCA ACGCCATCAC CAATCTCTGT GCTACGATTT TTGGGCAACT ATGGAGATTA GAGCCACTTT CAAGTGAAAA GAAGGAGATG TGGAGAAGGG AAATGGAGTG GATTCTTAGT GTTAGTGATC ACATCGTTGA GTTAACACCT TCAACGCAAA CTTATCCAGA CGGCAACAAG TTTGAGGTCA TGACTTGTCG ACCAAGATTT GATCTTTTCA TCAATCTCCC GGCTCTTCGT AAACTAGACA ATATGCTTCT CGATATATTG GCGAGTTTCA AGAAAACCGA GTTCTGGTAT GTTGATCAAG GGATTGTTGC TTCGGAAAAC GATGGCTCAG CTTCTTTCCG CAGAAAGATT CAGCGTCAAG AGGAGAAGTG GTGGTTGCCT GTTCCCCGTT TAGCACCTAA TGGTCTTACT GAAGAAGCAA GAACAGAATT GAATCACAAG AGGGAATGTG CGACGCAGAT ACTTAAAGCT GCAATGGCCA TTAACAGCCT TGCTTTAACC GAAATGGATG TTCCTGAAAC ATACCTTGAA ACTCTTCCAA AGAATGGTAG GTCCTGCCTT GGGGATGTTA TCTACAGGTA CATAACATCT GATAAATTTT CTGCGGAGTG TCTTCTCGAT TGCCTTGATC TGTCCTCTGA GCATATTGCT CTTGATATTG CAAACCGTGT GGAAGCTTCG ATATATGTTT GGCGGAGAAG AGTTCAAACA AAACTTGGAG TCAACAACAA TAATACTTCA AGCACTACTC CAAAGTTAAC ATGGGAAATG GTCAAAGAGC TAATGGCTGC TGGTGACAAA AGGGGATTGC TTGTGGAGAG ATCCGAAACT CTCTTACGTT GCTTGAAGCA GCGGTTTCCA TCTCTAACGC AGACTTCTCT AGACATTAGC AAGATTCAAT GGAACAAGGA TATTGGGAAA TCAATCCTCG AAAGCTACTC AAGGGCGTTG GAGAGCTTAG CATCAAACAT CATTGCACGA ATCGACGATT TACTCTACGT GGACGACTTA ACAAAGCGAT CAGATGATAA CATTCTGTTG TCAAGTCCAG CGGTCTGCAG CATTATAGCT CACAAGAAAG TAGTACCACT CCCTTATCTA ATATCTGCAT CAGGAACTCC ATACAGAACA AGCTTCTCAA CAACACCAGG CTTCTCTCCT TCAATGATTA GCCCCAAGAA AGGAGAGAGG AGGACACCTT ACTCCAGCAG AGACACTAAC AAAATCATTG AGAAAGGTCT TCCTTCTCGA GGATTTGGAG TGAGAAGAGT CTTGAACAAT TATCTTGGCA TGGAATCGAA ACTGAAAATA TGCGTGAATC CGTCAGATAA TGCAGATACA GCTGTGATTT GCAAAGAAGG TGGAGAAGAG AAGAAAAGAA ATTCAATATC AGTCCATCAA AAGGGTCCTC CAAAGTACAC AGTCTCTTAA |
| Length | 1830 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 2100401.. 2102747 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G05940.1 |
| Description | ROP guanine nucleotide exchange factor 5 |
| TAIR curator summary | Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. |
| Alias | [ATROPGEF5][ROPGEF5][ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5][ROP (rho of plants) guanine nucleotide exchange factor 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 14.5602 |
Ahg930410 | phragmoplast-associated kinesin-related protein, putative |
| 27.7128 |
Ahg487140 | GDSL-like Lipase/Acylhydrolase superfamily protein |
| 44.1135 |
Ahg324343 | |
| 47.0532 |
Ahg494047 | Plant calmodulin-binding protein-related |
| 47.4342 |
Ahg477561 | |
| 50.5964 |
Ahg918487 | SAP domain-containing protein |
| 56.2317 |
Ahg472970 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 60.8687 |
Ahg487165 | Glutaredoxin family protein |
| 72.5534 |
Ahg476492 | Auxin efflux carrier family protein |
| 74.3303 |
Ahg482381 | MATE efflux family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|