Detail



ID : Ahg325580

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|325580|fgenesh1_pm.C_scaffold_6000800
Sequence
ATGGCGAGTG GAGGAGGATA CGGAGACCCG TCGCAGAAGA TTGACTACGT CTTCAAGCTG GTGTTGATCG GAGACTCTGG TGTTGGCAAA TCGCAGATAC TGTCTCGGTA CGCGAGAAAC GAGTTCAGCT TAGATTCCAA AGCTACCATC GGCGTCGAAT TTCAAACTCG AACACTTGTT ATCGACCATA AGAGTGTCAA AGCTCAGATC TGGGACACCG CCGGCCAAGA ACGGTATAGA GCGGTGACGA GTGCGTATTA CAGAGGAGCG GTTGGGGCGA TGCTGGTTTA CGACGTGACT AGACGTCAAA CATTTGATCA TATCCCACGG TGGCTTGAAG AATTGCGAAA TAACGCAGAC AAGAACATTG TGATTATACT CGTTGGGAAT AAGTCTGATC TTGAAGATCA ACGAGCGATA TCGATGGAAG ATGCTAAGGA ATTCGCGGAG AAAGAAGGTC TTTTCTTCTT GGAGACATCA GCTCTAAACG CAGTCAACGT GGAGAGTGCT TTCTCCACTG TTTTGACTGA GATTTTCAAC TTTGTCAACA AGAAAAGTCT TGTTGCTGGT GAAGGAGAAG GTAATGGTGA TCCTGCATCG CTTGCTGGTA AGAAGATTGA TATTGCTCCA GGTCCTGGTC AGGTGATTCC AACGAAGAAT AGATTGTGTT GTAACACTTA G 
Length681
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3972180.. 3973024
Download Sequence
A.thaliana
AGI-codeAT5G65270.1
DescriptionRAB GTPase homolog A4A
TAIR curator summary
Alias[AtRABA4a][RABA4a][RAB GTPase homolog A4A]
Gene coexpression
MR
MR Locus Description
18.4391 Ahg330664 Calcium-dependent lipid-binding (CaLB domain) family protein
19.3391 Ahg920022 Predicted pyridoxal phosphate-dependent enzyme, YBL036C type
32.619 Ahg473609 Protein phosphatase 2C family protein
33.6749 Ahg475187 S-locus lectin protein kinase family protein
34.9857 Ahg490469 Ubiquitin-like superfamily protein
39.3446 Ahg898458 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein
53.2447 Ahg496783
54.7723 Ahg486382 multidrug resistance-associated protein 14
58 Ahg323188 UDP-Glycosyltransferase superfamily protein
60.2495 Ahg939927 Cystatin/monellin family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression