| Annotation |
|---|
| Description | jgi|Araly1|898458|Al_scaffold_0005_2424 |
| Sequence |
GACTACCGGA CGTGGCTTGC TGACATTGCC CTGTTCCGAA GGAAGACAAA GGTCTCGCTT CTTGCTGTGG GATCTTACGA TAATACCGTG CGCATTCTAT CTTTGGATCC TGACGACTGT CTGCAGATTC TCAGCGTGCA AAGTGTCTCT TCGGCTCCGG AGTCTCTGCT ATTCCTCGAA GTTCAGGCAT CGATTGGTGG AGAGGATGGT GCTGATCACC CGGCTAATCT CTTCCTCAAT TCTGGTCTGC AGAATGGTGT TCTTTTCAGA ACGGTGGTGG ACATGGTGAC TGGTCAGCTT TCGGATTCTC GCTCCCGGTT CTTGGGGCTG AAGCCTCCCA AGCTATTCTC CATTTCTGTG AGAGGCCGGT CTGCAATGCT GTGTTTGTCT AGCCGACCTT GGCTTGGTTA TATTCACCGG GGACACTTCC ACTTGACGCC TCTGTCTTAT GAGACTTTGG AATTTGCTGC CCCCTTTTCA TCTGATCAGT GCGCTGAAGG TGTTGTCTCT GTCGCAGGGG ATGCTCTGAG AATTTTCATG ATTGATCGTC TTGGTGAAAC GTTCAACGAA ACAGTGGTCC CTCTGAGGTA CACGCCTAGA AAGTTTGTTC TCCAACCCAA GCGGAAGTTG TTGGTTATTA TCGAGAGTGA CCAGGGAGCA TTCACCGCAG AAGAGCGTGA AGCTGCAAGA AAGGAGTGCT TCGAGGCTGG TGGAGTGGGA GAAAATGGTA ATGGCAATGC AGATCAGATG GAGAATGGTG CGGATGATGA AGATAAGGAA GACCCGCTTT CTGATGAGCA GTACGGTTAT CCAAAAGCAG AGTCTGAAAA GTGGGTTTCT TGCATCAGAG TTCTTGATCC CAAGACAGCT ACGACAACTT GTCTCCTGGA ACTTCAAGAC AACGAAGCTG CATACAGTGT CTGTACGGTG AATTTCCATG ATAAAGAGTA TGGTACATTG TTGGCTGTTG GTACAGTCAA AGGGATGCAG TTCTGGCCCA AAAAGAATCT AGTGGCTGGG TTCATACATA TTTATAGGTT TGTGGAGGAA GGGAAATCTC TTGAGCTTCT TCATAAGACG CAAGTAGAAG GTGTTCCTCT TGCTCTGTGC CAGTTCCAAG GAAGACTGCT GGCAGGGATC GGACCTGTCC TCAGATTGTA TGATTTGGGG AAAAAGAGAC TGCTTAGGAA ATGTGAAAAC AAGCTCTTTC CAAACACCAT TATCTCTATC CAAACTTACC GTGACCGTAT ATACGTTGGT GACATTCAGG AGTCTTTCCA TTACTGCAAG TACAGGCGCG ACGAGAATCA GCTATACATA TTTGCGGATG ACTGCGTGCC GAGGTGGCTG ACAGCATCGC ACCATGTGGA TTTCGATACC ATGGCAGGTG CAGATAAGTT TGGGAATGTG TATTTTGTGC GGTTGCCTCA GGATCTGTCT GAGGAGATAG AAGAAGACCC GACAGGCGGG AAGATAAAGT GGGAGCAAGG AAAGCTGAAT GGAGCACCGA ACAAAGTGGA TGAGATAGTA CAGTTCCATG TTGGGGACGT AGTGACGTGC TTGCAGAAAG CTTCGATGAT CCCAGGTGGA TCGGAATCCA TAATGTATGG AACAGTGATG GGTAGCATAG GGGCATTACA TGCTTTCACA TCGCGTGATG ATGTGGATTT CTTCTCTCAT CTGGAGATGC ACATGAGGCA GGAGTATCCT CCTCTCTGCG GGAGAGACCA CATGGCTTAC AGATCTGCAT ATTTTCCGGT CAAGGACGTG ATAGATGGAG ATCTGTGTGA GCAGTTCCCG ACACTCCCAA TGGACTTGCA GAGGAAAATA GCAGACGAGT TGGATCGAAC ACCTGCGGAG ATTCTGAAGA AGCTCGAAGA CGCAAGGAAT AAGATCATTT AA |
| Length | 1902 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 16407278.. 16409372 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G55220.1 |
| Description | Cleavage and polyadenylation specificity factor (CPSF) A subunit protein |
| TAIR curator summary | |
| Alias | [AtSAP130b][SAP130b][Arabidopsis thaliana spliceosome-associated protein 130 b][spliceosome-associated protein 130 b] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg324042 | |
| 2.82843 |
Ahg495386 | DNAJ heat shock N-terminal domain-containing protein |
| 3.4641 |
Ahg475145 | phospholipases;galactolipases |
| 3.4641 |
Ahg495654 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 3.60555 |
Ahg481593 | C2H2 zinc-finger protein SERRATE (SE) |
| 5.56776 |
Ahg485204 | relative of early flowering 6 |
| 6.08276 |
Ahg945292 | SPFH/Band 7/PHB domain-containing membrane-associated protein family |
| 6.245 |
Ahg929675 | nuclear RNA polymerase D2B |
| 7 |
Ahg481646 | sec23/sec24 transport family protein |
| 7.48331 |
Ahg476277 | Pentatricopeptide repeat (PPR-like) superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|