Detail


ID : Ahg327681

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|327681|fgenesh1_pm.C_scaffold_6002901
Sequence
ATGGAAGCTG AAAAAGAAAC AGAGCAAGAA GGAAACTTAT CAGTAATGAT ACTTCCGGTG TTACCAGTTA AACCCAACAC TCACAGCCAT TCTATGTCAT CACCTATTCA CAGTTCCATA TCAGCTTCAG TCCCATTTAG CTGGGAAGAA GAGCCTGGCA AGCCCAAGCA ACACTCTTCT TCTTCTTCCT CTTCCTCCTC TTCCTCACCA TTAACTACTT ATTCTTCATC TCCTTTTGAA ACCCACAAGT CCTTGGAGCT ACCACCAAGG CTTCACTTAC TTGAAAAAGA TGGAGGATCA GTCACCAAAC TTCACTCGCC TATAACAGTC TTTGATGGAC CTTATAGCAT GACGAGATCA AAAAGGATGG ATTCACCTTC CTTTAGGATG ACGGTGAAAG GAAGTGCTGA TTGTTATGGG TCTTTCAGGA GTGACATCTA TGGTGATTTA GAGGATGTGG AAGTGGACTC TAAGCAGCAG GAGAACTTGA GTAGTGTCTC TTTGGCTATT GTAAAGAAGC GAGGGAGATT AGGGTTTTTT GGGTTTAGGA GGAGGAGAGC CTTGAAAGGA AAAACAGAGT TTGGTAGAGG TAGTTATGTG TTTCCTTCTT CTGTAGACAG AGAGAGTGGA TACAGCAGAA AAGAAGAGGA AGAAGAAAAA GAAGACAAAA GGTTAGGTTA TGGTGATGGT GATGGTATTA GTTGCAGCCA AAGCAGCAGG TTTTGTGAAG TGACGATGAT CTCAAGCATT AGCAGAACAG GGAGCTTCTC TACTCTGCCT GCACCACCTT CTTCTTCTTC AAAGTCTCAC TTTTGGGTAA CTCACATCAT GGACCATCAT CAGTATCATC ATCATGATCA ATACCAACAT CAAATGACTA TTACTAACAA TAATCCCTAT AACACCATCG TCACAACACA ACCACCACCA CCTACAACAA CAACAATGGA TTCAACAACA GCAACAACAA TGATAATGGA TGATGAGAAG AAGTTGATGA CGACGATGAG CACTAGGCCG CAAGAACCAA GAAACTGTCC AAGATGCAAC TCAAGCAACA CCAAGTTTTG TTATTACAAC AACTACAGCT TAGCACAGCC TAGGTACTTG TGTAAGTCTT GTCGGAGATA TTGGACTGAA GGTGGCTCTC TCCGTAACGT CCCCGTAGGC GGAGGTTCTA GAAAGAACAA GAAGCTTCCA CTACTACTTT CTAATTCCTC TACTTCTTCT TCCACCAAGA ACCTCCCAGA TCTTAACCCT CCGTTTGTCT TCACGTCATC ACCATCATCA TCAAACCCTA ACAAGACGCA TCAAAACAAT AATGACCTCA GCCTTTCATT CTCCTCCCCT ATGCAAGACA AGCGAGCTCA AGGGCATTAC AGTCATTTCA CCGAGCAAGT TGTGACAGGA GGGCAGAACT GTCTTTTCCA AGCTCCTATG GGAATGATTC AGTTTCGTCA AGAGTATGAT CATGACCACC ACAAAAAGAA TCTTGGGTTT TCATTAGACA GGAACAAGGA AGAGATTAGT AATCATGATA ACTTCGTTGT TAATGGAGAA GGAAGTAAGA TGATGTATCC TTATGGAGAT CATGAAGACC GTCATCAACA TAACCATGTG AGACACGATG ATGGTAATAA GAAGAGAGAA GGTGGTTCAA GCAATGAGCT ATGGAGTGGA ATCATCCTAG GTGGTGACAG TGGTGGACCA ACATGGTGA
Length1719
Protein Sequence
Protein Residue
Map Locationscaffold_6: 23037392.. 23041149
Download Sequence
A.thaliana
AGI-codeAT4G00940.1
DescriptionDof-type zinc finger DNA-binding family protein
TAIR curator summary
Alias[AtDOF4.1][DOF4.1][ITD1][DNA binding with one finger 4.1][INTERCELLULAR TRAFFICKING DOF 1]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg943792 galacturonosyltransferase 3
14.8997 Ahg483290
20.4939 Ahg932754 Leucine-rich receptor-like protein kinase family protein
28.9828 Ahg497160 Protein kinase superfamily protein
31.241 Ahg934176
36.8239 Ahg481113 Alkaline-phosphatase-like family protein
40.2492 Ahg941035 Ankyrin repeat family protein
43.3128 Ahg482040 Plant protein of unknown function (DUF828)
44.5982 Ahg484555 ARM repeat superfamily protein
48.0937 Ahg941373 Plant protein of unknown function (DUF946)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression