| Annotation |
|---|
| Description | jgi|Araly1|327694|fgenesh1_pm.C_scaffold_6002914 |
| Sequence |
ATGGATACTG AAGCCACTTT AGATGTCCTA AGATATGCAT TTGTAGAAAA TGAAATGGTG AAGCATGAAA GTCACCTGCT GGAGTCCGGT GAAGTAAGTT TAGAGTCCAA GACTGATGGC AGTTTACCCG AAGTTAGCAA CAATAGACTA ATCCAGAATC TTATAGATGC TCTAGTTCAT GTTCTTGACG GGGGCTTAAG CAAGGCTGAT GAATCTGGCG ATCCAAATGA TTCAAAATCA GATAAAAATT GGCCTTCCAA GGAGGATACA AGTCATCTAT TTGAGTTTGT TGCATATTAT GCAGCACTTG GTAGAGTTAG TATTCCCAAG AGCGTATTGG CACAGATTTT AGATTACTTA ACATCAGATC ACATTCTTCC AACTTATAAC GTGTCTTCTA AAATGAGAGA GAACCAATTA CTAAACCTTC TGAAAGCTGT TCCGGAGACT GATTGGGATG TAGATGATGT AACACAGCTT TGTGAGAAAG CACATTTTTA TCAGGTTTGT GGCTATATTC ATATTATCGG TGGAAGGTAC GTTGCAGCTT TGGATAGCTA CATGAAAGAG GCAGATGAAC CCATACATTC GTTTTGTTAT GTGAACAAGA TGCTGTCACA GTTGAGTGGA GATAAATTCA CTGCCTTTCA ATCTGCAGTT ATTTCTAAGA TTCCCGAGCT TCTTGAATTG AGCAGACAGG GAGCATTCTT CCTGATTATT GATAATTTGA AAGACAACAT TACACGCATT CAAGAGCAGC TCCATTCTCA TCCAAGAAGC TTGTTCCTGT ATCTCAAGAC TGTTATTGAG GTTCACTTGT CTGGGAGTCT TGATTTTTCT CGTCTAAGAA AACATGAAGC TGTAGATAAT TCGGGTGAAA ACATTAGAAG GGAAATACCC AAAGAGGCGG AGATTTATTT GGAAGGACTC AATGGCTTTC CCAAATTCAT CCAAGATAAT CCAGTCAATG TGACTGATGA CATGATTGAG CTTTACTTGG AGCTACTATG CAAGTACGAA CCGAAGTCCG TCTTGAGATT TCTGGAAACC TTTGACAGCT ACAGGGTGGA ACACTGTCTA CGCCTCTGCC AGGAATATGG AATTGTAGAT GCAGCAGCAT TTCTCTTGGA GAGGGTGGGT GATGCAGCAA GTGCTTTGTC ACTTACACTC TCTGGACTCA ATGAAAAATA TGTCGAGCTT GAAATTGCAG TGGAATGCCT AATGTCAGAA ATGAAATTGG GTGCTAGCGA AGGAGCCAGT GTGGAACAAT TCAGTAGTGC TTTAGAGTTG AAAGAGGTAC ATGACATACA AGGTGTTCTG CAAGCCTGTG TAGGATTGTG TCAGCGCAAC ACTCCTCGTC TTAATCCGGA GGAGTCAGAG ATACTTTGGT TTCGCTTTCT TGACACTTTC TGTGAACCTT TGATGGATTC ATATCGGGAA CCGAGGAACA CCGATGGAAG AAACAAAGGT CCTTTAGGTG TTAAATCATT GGAACTTCAT GTCAATGAAT CAGACGTTGC AATTAAGTGG AGGATTCCAA GATCTGATAC GGCGGGTACA CACATCCTGA GAAAGCTCAT ATCTCAATTT ATCAAAGAGA TTGTTGAAGG AATGATAGGA TATGTTCGTC TTCCAACAAT CATGACAAAA CTCCTCTCCG AAAACGGTAC TCAAGAGTTT GGTGATTTTA AACTTACAAT ATTGGGAATG CTTGGAACAT ATGGCTTCGA ACGGAGAATA CTGGATACTG CAAAGTCTTT AATCGAAGAT GATACATTCT ACTCCATGAA CTTACTCAAG AAAGGTGCTT CTCACGGGTA TGCACCAAGA AGTTTGCTTT GTTGTATATG CAGTTGCCCT CTCACCAAGA CATTTTCTGC TCTGCGTGTG CGTGTTTTCA ACTGTGGCCA CGCAACACAT CTTCAATGTG AACCTTTAGA GAATGAGATG TCGTCATCGT CATCATCAAT TCATGTCTCC TCGTCAGGCT GTCCTGTCTG TATGACCAAG AAGACGAGCA AAAGCTCTGC TAAAGGTAAA TCGTTCTACC TAGATTATGG ACTGATAAGC ACAATTTCGT CAAATGCCGG GTCTTCACAA CGTGCTTCGC CTTACTCACA CGAGAATGAA ACGAGCGATC ATTCTCATAG CCAGCATATA TCACGGTTTG AAATCTTAAC CAACCTTCAG AAAGATCAGA GATTGGTACA GATAGAGAGC TTGCCTCGAT TAAGGCTTGC ACCTCCGGCC GTGTACCACG AAAAAGTGAG CAGACTCTCG GGTTTTACCC CGAAAGAGAG TAGCGGTAAA GACACAAAAC CTGTAAAAAC CGGACAGGGT AAGAAACCGA AAGCAAAAGG ATCGATGTTT CGGTCAAGAT TTGGTAAGTC TTTTCTTTTA TAG |
| Length | 2403 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 23127359.. 23130875 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G00800.1 |
| Description | transducin family protein / WD-40 repeat family protein |
| TAIR curator summary | |
| Alias | [SETH5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.38516 |
Ahg474047 | stomatal cytokinesis defective / SCD1 protein (SCD1) |
| 5.65685 |
Ahg475897 | PAS domain-containing protein tyrosine kinase family protein |
| 6.08276 |
Ahg888992 | sequence-specific DNA binding transcription factors |
| 6.48074 |
Ahg490566 | cationic amino acid transporter 9 |
| 8.3666 |
Ahg473277 | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein |
| 9.05539 |
Ahg496668 | magnesium transporter 9 |
| 9.48683 |
Ahg484577 | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein |
| 9.53939 |
Ahg946047 | Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase |
| 11.1355 |
Ahg475940 | Protein of unknown function (DUF1218) |
| 12.3693 |
Ahg938459 | mitogen-activated protein kinase phosphatase 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|