Detail


ID : Ahg328395

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|328395|fgenesh1_pm.C_scaffold_7000622
Sequence
ATGGAATCGG AGAAGAATCC CACCACAGTA TTGAGCGCCA TTACAAGACC TTCGTGGGCG TTTCTTCTCC TTGTTTTCAC TGCCTTAGCG ATTCTCTCTC TCCAAATCTC TTCCAATTCT TTTATCCCTA TCTGGATCCC GACTTCTCAA TATCACGACC CGGTTACCTG CTCCGGGTTT TTCAACCATG ACCCGTTCCC GAACCGGAAA GTCATGTCGA TTACCGATTT CGGCGGCGTA GGAGACGGCA AAACGTCGAA CACGGAGGCT TTCCGCCGCG CCGTACGGCA CCTTGAAGGT TTTGCGGCCG AGGGTGGGGC CCAGCTCAAT GTCCCGATGG GCTCGTGGCT CTCTGGAAGC TTCAACCTCA CCAGCAATTT CACGCTCTTT CTCCAACGCG GCGCTGTCAT TTTGGGATCC AAGGACCTAG ACGAATGGCC AATAGTAGAG CCATTGCCTT CTTATGGAAG AGGCAGAGAG AGACCTGGTG GTAGACACAT TAGCCTCATT CATGGAGACA ACCTCACTAA TGTTGTCATT ACAGGAGAAA ATGGGACAAT TGATGGACAG GGGAAAATGT GGTGGGAGCT ATGGTGGAAC AGAACATTGG TGCATACGAG AGGCCATCTT ATTGAACTCA AGAACTCTCA TAATATTCTC ATCTCTAACC TCACTTTGCT CAATTCTCCT TTCTGGACAA TCCATCCTGT TTATTGCAGT AATGTTGTTA TTAGAAATAT GACCATCCTT GCTCCGATGA ATGCTCCTAA CACCGATGGT ATAGATCCAG ACTCAAGCAC CAATGTCTGC ATTGAGGACT GTTACATTGA AAGCGGTGAT GACCTTGTAG CTGTGAAGAG CGGGTGGGAC CAGTATGGAA TGGCTGTGGC CCGTCCGAGT TCAAACATCG TAATCCGAAG GATCTCTGGT ACTACTCGCA CTTGTTCAGG AGTTGGAATA GGCAGTGAGA TGTCTGGTGG GATTTTCAAC ATAACCGTCG AAGATATTCA CGTCTGGGAT TCTGCGGCCG GGCTCCGCAT AAAAACAGAT AAAGGGAGAG GCGGGTACAT TTCGAATATC ACCTTTAATA ATGTGTTATT GGAGAAAGTG AAAGTTCCGA TTAGATTCAG CAGTGGCTCA AATGATCACT CGGACGACAA ATGGGATCCG AAAGCTCTTC CGAGAGTAAA AGGGATTTAC ATTAGCAATG TTGTGAGTCT GAATTCAAGA AAGGCCCCTA TGTTGCTCGG TGTTGAAGGC ACTTCGTTTC AAGACGTATG CTTAAGGAAT GTTACGCTTC TTGGGTTACC GCAGACCGAG AAATGGAAAT GCAAGGATGT TTCAGGGTAC GCGAGTGATG TTTTTCCTCT GTCATGTCCA CAGTTGTTGC AGAAGAAAGG TTCGATATCT CAGTGTTCAT ATAGATGA
Length1428
Protein Sequence
Protein Residue
Map Locationscaffold_7: 3063259.. 3066247
Download Sequence
A.thaliana
AGI-codeAT4G33440.1
DescriptionPectin lyase-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.48074 Ahg481943 Pseudouridine synthase family protein
20.2485 Ahg481207
24.3721 Ahg358221 BTB/POZ domain-containing protein
27.7128 Ahg902795 WD40/YVTN repeat-like-containing domain;Bromodomain
29.0689 Ahg335523 cellulase 5
32.4037 Ahg470720
35.0286 Ahg939847
40.8167 Ahg470476 O-fucosyltransferase family protein
46.3681 Ahg494915 ENTH/VHS/GAT family protein
55.1362 Ahg948905 Protein of unknown function (DUF565)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression