| Annotation |
|---|
| Description | jgi|Araly1|948905|scaffold_800792.1 |
| Sequence |
CTGTTGCATT CAGTTTCAGG ATGGCACATT CTTTGAGTTT CATTTCGACC AACTTGAACA GTGTAGTTCT TAATCATCAT CATCAGTGGA CGAGTTACGG AACTTTGGTG TCGTCGCCAT TTAAACCTAA GAGGAGATTT TCAAGAAGCA TTAGAGCTTT GCAAGAGACT GAAGGTCCAA CTCCAAGAAG ATTGATAGAC ATTATAAGAT CTGTTCCTGA AATCTCTAGG AATTACTTCA AGAAGCCTTC AAGAAGAACG CTTTTCGGAG GAATCTCGTT GTTAGGTGGG TTTTATGTCG CGCAGACTAT CTCTCTGTCG TTTGGAGCTT TGGGAGTGAA CGATGTTATC GCTGCGGTTT TATGTGTTCT TTTGACAGAG TATGTGACTA GATTCTACTA TAGCCGTACC ATGGTCACAT TTCCGATTGC TCTGCTTAAT AATTTCAAGA TGGGTTTCAC TTATGGTCTC TTCATTGACG CATTCAAGCT AGCTAGCTAA GTGTTTACCA GAGATCCAAA GCG |
| Length | 523 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 4589814.. 4590336 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G43050.1 |
| Description | Protein of unknown function (DUF565) |
| TAIR curator summary | Chloroplast localized YCF20-like gene involved in nonphotochemical quenching. Has overlapping functions with npq7 |
| Alias | [NPQ6][NONPHOTOCHEMICAL QUENCHING 6] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.24264 |
Ahg946121 | Pentatricopeptide repeat (PPR-like) superfamily protein |
| 6.16441 |
Ahg932189 | oxidoreductase, 2OG-Fe(II) oxygenase family protein |
| 9.48683 |
Ahg922250 | Ribosomal L18p/L5e family protein |
| 20.2731 |
Ahg902101 | Galactose oxidase/kelch repeat superfamily protein |
| 20.9284 |
Ahg490185 | copper ion binding |
| 41.1825 |
Ahg471648 | basic pentacysteine 2 |
| 55.1362 |
Ahg328395 | Pectin lyase-like superfamily protein |
| 55.1815 |
Ahg924811 | Mitochondrial transcription termination factor family protein |
| 56.285 |
Ahg920873 | Pentatricopeptide repeat (PPR) superfamily protein |
| 64.2651 |
Ahg900749 | Tetratricopeptide repeat (TPR)-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
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| The four seasons |
|
|
| Growth Chamber expression |
|
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