Detail



ID : Ahg331329

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|331329|fgenesh1_pm.C_scaffold_8000672
Sequence
ATGGCGTCGA ATTCGGAAGC GGGAGGATCG GCGGATTACG AAACATTGAT GTCGACATCG GACGTTGAGC TATTGAAGAG GGCGTGGCGT AACGAGAAGG CGGCGCCGGA AATTCTTCAA TACGAAGGAG CTCTTGTCCA AAGAGCCAAA GAACAGATCG AACTGGTGGA AGAAACAATT GACGATTACG TGGAAAATGG CATAGACCCT TTGGTGGTGT CTCTTTATCA GATGGATTTA GACAGAACCC AGTTTCTACT CAGATCCTAT CTCAGGGTTA GGCTCCTCAA GATAGAGAAG TTTATGTTCC ACAACCTTAA GTCAGAAGAA GCTGAAAGGC GACTTTCTGA GCAAGAGAAG GTGTTTGCTA CAAGGTGTGC TGATGATTTA GCAAAGCATT TCGAAGAGAC TGTACTGCTT AAGTTGCCTG AGAATTATCA GTCTGTCCTC AAGCAATCCC TTATAAGTGA AGTGGATGAT ATGGTGCCGC AGCCGCATTT GGATACCTTT GTTGTTTGTA GAAGCAAGAA CTTTGTCTCC CTCAATCTAT ACGATGAAGG AGAGAGCCCC GAGACTGTGG AGATGGAGCG CGGTGATCTC TACTTCATAC GTTACAAGAT TGTAAAAGGA GCAATCGAAT CAGGCCAAAT TGACTTGATC TGA 
Length663
Protein Sequence
Protein Residue
Map Locationscaffold_8: 11771872.. 11773253
Download Sequence
A.thaliana
AGI-codeAT5G49010.1
DescriptionDNA replication protein-related
TAIR curator summarySimilar to the SLD5 component of GINS complex, which in other organism was shown to be involved in the initiation of DNA replication.
Alias[EMB2812][SLD5][EMBRYO DEFECTIVE 2812][SYNTHETIC LETHALITY WITH DPB11-1 5]
Gene coexpression
MR
MR Locus Description
9 Ahg916441 DNA replication protein-related
14.8324 Ahg354556 F-box family protein with a domain of unknown function (DUF295)
22.7816 Ahg331653
62.3298 Ahg932731
67.2161 Ahg906973
73.9594 Ahg488901 isopentenyltransferase 9
83.3007 Ahg493058 Ribosomal protein L32e
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression