Detail


ID : Ahg488901

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488901|fgenesh2_kg.6__2035__AT5G20040.1
Sequence
GTTCGGTTAA TGTGTAAACC TAACCGAACC GTAGTTCTCT AATCCCTTGC TCACACTGTC GTCGTCTCTC TTCGAGATGA GCTTTTGCGC GGGTCATCCT TATATCCTTA GCAAACTTCT GCTATCTTCC AAATTCTAAG GTTTATAATG GTCATTAGCA GTGGCGTATT TTTGACCCGT ACATGTTACT TGAAGCTGCA ACCGCCAAGC CTTGTACTGC GCCGGAGATT CTGCGCAGCC ACAACGGATT GCTCTGTTCC TCTGAACGGG ACCAAGAAGA GAAAGTCTGA AAAGGAGAAG GTCATTGTGA TTTCTGGGCC CACCGGCGCC GGAAAAAGCA GACTTGCTAT GGAGCTCGCC AAGCGTCTCA ATGGCGAAAT CATCAGTGCT GACTCCGTTC AGGTGTACAG AGGCCTTGAT GTTGGATCAG CCAAGCCATC AGATAGCGAT AGAAAGGTGG TGCCTCATCA TCTTATAGAC ATTTTGCATC CGTCTCAAGA CTACTCTGTG GGGCAATTTT TTGATGATGG AAGGCAAGCT ACCAAGGATA TTCTTAATAG AGGGCGTGTT CCCATTGTTA CGGGTGGCAC TGGATTGTAT CTGCGATGGT TTATCTATGG GAAGCCGGAT GTGCCTAAAC CTTCTCCAGA AGTCATCGCT GAGGCCCATG ATATGCTAGT TGATTTTCAA ACCGAATATA ACTGGGAAGC AGCTGTGGAA TTGGTGGTCA ATGCTGGTGA TCCAAAAGCC TGTTCTTTAC CTCGTAATGA TTGGTACAGA CTACGTCGTA GCCTCGAGAT ACTCAAGTCA ACTGGATCTC CGCCGTCTTC CTTTCGCATT CCATATGATT CTTTCCGAGA AAATTTAAAT TCTCCTGATG CCGATGACTT GCTTGAGGAC GGTTCATCTG CTGATATCTC CATCCAAAAC ATAGAGACAG ATTTGGACTA TGACTTCCTT TGTTTTTTCT TGTCAAGCCC ACGGGTTGCT CTCTACAGAT CTATTGATTT CAGATGTGAA GACATGCTTT CAGGACCCAA TGGAGTTTTG TCAGAAGCTA GATGGCTTCT TGATCTTGGT CTTCTTCCAA ACACAAATCC TGCAACTCGT GCTATTGGGT ACAGACAGGC CATGGAATAT CTACTGAAAT GCCGTCGATA TGAGGGTGAA AGTTCCCCTA GAGAATTTTA TGGTTTCTTG AACAAATTTC AGACAGCATC CAGAAACTTT GCAAAAAGGC AAATGACATG GTTCAGGTGT GAGCCTATGT ACCACTGGCT TAATGCTTCT AAACCTCTGG ATTCGATACT TCAATGCATA TATGATGCTT ATGAGAGCGA AGCAGAGACG GTGGAGATAC CAGAGTCTCT AAGAATGAGC AAAGACGTAA GAGATTCCCG AGAAGCTTCT GAACTAAAGT TGTACCGCTC CAAAAACAGG CATTTCGTAA GACGAGAGGA CTGTGATTCG GTGTTAGAGT GGATCAGAAG TGAAGGATGT AAGACTGAAG CTTCATGTGT GGAAAGCGCA GTAGCATAAC CACTGCTTCA TTCTATCCGG AAAAGCCAAA ACCAAAACCA AAACAAAAGT GTGTTAGTAG ACAAGATTTT GGATTATGTT CTTGA
Length1625
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8076236.. 8079617
Download Sequence
A.thaliana
AGI-codeAT5G20040.3
Descriptionisopentenyltransferase 9
TAIR curator summaryEncodes tRNA isopentenyltransferase AtIPT9.
Alias[ATIPT9][IPT9][ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 9][isopentenyltransferase 9]
Gene coexpression
MR
MR Locus Description
6.85565 Ahg313748 Replication factor-A protein 1-related
9.16515 Ahg485806 fructokinase-like 1
11.4891 Ahg928272 Tetratricopeptide repeat (TPR)-like superfamily protein
18.4932 Ahg490575 Mitochondrial transcription termination factor family protein
20.4939 Ahg946627 pentatricopeptide (PPR) repeat-containing protein
22.0907 Ahg946470 Ribosomal protein L19 family protein
22.9783 Ahg482933 pseudouridine synthase family protein
23 Ahg938680 Eukaryotic rpb5 RNA polymerase subunit family protein
26.1534 Ahg479727 Tetratricopeptide repeat (TPR)-like superfamily protein
27.1293 Ahg487703 P-loop containing nucleoside triphosphate hydrolases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression