| Annotation |
|---|
| Description | jgi|Araly1|331709|fgenesh1_pm.C_scaffold_8001052 |
| Sequence |
ATGAATTATC TTCTTGGAGC TTTCAAGCCG GCATGTAATA TTTCAATCAC ATTCACTGAT GGGAAAAACC GTAAACAGGT ACCCATTAAG AAAGATAATG GACAAATAGT TATGACTCCA CTTTTCCAGA GTCAAGAAAC TATTGCTGGG AAGATTAACA TTGAACCATA TCAAGGGAAA AAGGTGGAGC ACAATGGTGT AAAAGTTGAG CTTCTTGGTC AAATAGAAAT GTACTTTGAC AGAGGAAACT TTTATGACTT CACTTCCTTG GTGCGTGAGA TTGATGTACC TGGGGAAATA TATGAAAGAA AGACATACCC TTTTGAATTT TCGAGCGTTG AGATGCCATA TGAGACATAC AATGGCGTGA ATGTGCGCCT AAGGTATGTC CTCAAAGTAA CAGTCACACG TGGTTATGCT GGAAGCATCG TGGAATACCA GGACTTTGTG GTCCGTAACT ATGTTCCGTC TCCTCCAATC AATAATAGCA TTAAGATGGA AGTTGGAATC GAGGACTGCC TGCATATCGA GTTTGAGTAC AATAAAAGCA AGTATCACCT AAAAGATGTT ATCCTTGGGA AAATATACTT TCTTCTGGTG AGAATCAAGA TAAAGAATAT GGATCTTGAG ATCAGACGGC GAGAATCAAC TGGAGCAGGA GCTAATACTC ACGTCGAGAC AGAAACACTA GCCAAATTTG AGTTAATGGA TGGTGCTCCA GTTAGAGGCG AATCGATACC TGTAAGAGTG TTCTTGACAC CATATGATCT GACACCAACG CATAAGAACA TAAACAACAA ATTCAGCGTA AAGTATTATC TAAATCTCGT GCTGGTGGAT GAAGAGGATC GCCGTTACTT CAAGCAACAA GAAATCACCT TGTACAGGCT CAAGGAGGAG ACATCTTGA |
| Length | 909 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 14861766.. 14863605 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G53530.1 |
| Description | vacuolar protein sorting 26A |
| TAIR curator summary | Homolog of yeast retromer subunit VPS26. Part of a retromer-like protein complex involved in endosome to lysosome protein transport. |
| Alias | [VPS26A][vacuolar protein sorting 26A] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 19.8494 |
Ahg487613 | Plant calmodulin-binding protein-related |
| 32.8786 |
Ahg489556 | Protein of unknown function (DUF1624) |
| 34.322 |
Ahg938727 | Insulinase (Peptidase family M16) family protein |
| 37.6696 |
Ahg473609 | Protein phosphatase 2C family protein |
| 38.6523 |
Ahg478797 | Protein of unknown function (DUF3511) |
| 40.6448 |
Ahg927471 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
| 44.5982 |
Ahg482340 | Nucleic acid-binding, OB-fold-like protein |
| 45.4753 |
Ahg472467 | phytochrome-associated protein phosphatase type 2C |
| 47.4974 |
Ahg898070 | saposin B domain-containing protein |
| 72.7324 |
Ahg481908 | alternative NAD(P)H dehydrogenase 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|