Detail



ID : Ahg489556

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489556|fgenesh2_kg.6__2690__AT5G27730.1
Sequence
AATGGCGGAA ATCAAAGTGG AGAGGAGTCT CGCCGGAAAC AACAGACCAA GACTTGCTTC TCTCGACATC TTCCGCGGCC TCACTGTCGC CTTGATGATT CTCGTGGATG ACGCCGGAGG AGACTGGCCA ATGATTGCTC ACGCTCCATG GAACGGCTGC AATTTGGCTG ATTTCGTCAT GCCTTTCTTT TTGTTCATCG TTGGCGTCTC CATCGCTCTT TCCTTGAAGA GGATTTCGAA TAAATTTGAA GCTTGTAAGA AGGTGTGTTT TAGGACCTGC AAGCTTCTTT TCTGGGGTCT TCTACTGCAG GGTGGATTCT CTCATGCTCC TGACGAATTA AGCTATGGTG TTGATGTGAC TATGATGAGG TTTTGTGGGA TTCTTCAGAG GATTGCTTTA TCCTACTTGG TAGTAGCATT GATCGAAATC TTCACAAAGG ACTTACATGA GGAGAATCTG TCAACTGGAA GGTTGTCAAT ATTCAAGTCA TATTTTTGCC ATTGGATTGT GGGTGTATCA GTTCTCGTGA TTTATCTGGC TACACTCTAT GGAACTTACG TTCCTGACTG GGAATTTGTT GTCAATGATA AAGATAGCAT TCTGTACGGG AAAATCCAAT CTGTATCATG TGGAGTGAGA GGAAAGCTAA ACCCTCCTTG CAATGCTGTT GGATATGTTG ACAGAAAAGT TTTAGGGATC AATCATATGT ATCACCATCC TGCGTGGAGA CGAGCCAAGG CTTGCACCGA TGATTCCCCC TATGAGGGAG CTTTACGCCA AGATGCACCG TCATGGTGCC GTGCTCCGTT TGAGCCTGAA GGAATCTTAA GCTCCATATC TGCTATTCTC TCTACAATCA TCGGAGTCCA TTTTGGACAT ATTATCATAG ACTTGAAGGG GCATTCAGCT CGGCTGAAAC ATTGGATCTC CACCGGTCTT GTTCTCCTCA CTCTGGGACT TACTCTGCAT TTCACACACT TGATGCCTTT GAACAAACAA CTCTACAGTT TCAGCTACAT ATGTGTGACC TCCGGTGCAG CTGCACTCGT CTTCTCTTCA TTGTATTCTC TGGTTGATGT ATTGGAGTGG AAACACATGT TTCTGCCTCT AAAATGGATA GGCATGAACG CAATGCTGGT CTACGTGATG GGAGCTGAAG GCATTTTGGC TGCTTTCTTC AATGGTTGGT ACTATCGCCA CCCACACAAT ACACTGATAA CTTGGATCCG AGAGCATGTT TTTATCAGAG TTTGGCATTC AAAAAGAGTT GGTGTGCTTA TGTATGTCAT TTTCGCGGAG ATTCTCTTCT GGGGTTTGGT CACTGGTGTG TTTCATAGAT TCAAGATCTA TTGGAAACTC TAAGTAGACC GTGAAAATAC CTACTCTATG TTGAAGTTGT ACTAGTTTGT CGCAACTACA ATCAAATTCA TGATAAGTTA TGTAATCAAA TTCATGATAA GTTATGTATA ATGTTTATAA ACCTTGAGTC AGAATCCTTT GTTGATGATA TAGGCTTTGT ATGTGCATTT CAGGCCGGTT TCACCGATCT ACCCGGATTG GAACTTAAAT ATCCG 
Length1575
Protein Sequence
Protein Residue
Map Locationscaffold_6: 11881614.. 11884532
Download Sequence
A.thaliana
AGI-codeAT5G27730.1
DescriptionProtein of unknown function (DUF1624)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.65685 Ahg932396 Leucine-rich repeat protein kinase family protein
6.16441 Ahg471398 C4-dicarboxylate transporter/malic acid transport protein
7.93725 Ahg477519 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase
9.53939 Ahg491257 D111/G-patch domain-containing protein
10.3441 Ahg924077 Pentatricopeptide repeat (PPR) superfamily protein
10.9545 Ahg491556 ATP-dependent caseinolytic (Clp) protease/crotonase family protein
12.6886 Ahg928205 germin-like protein 8
12.7279 Ahg934611 Transducin/WD40 repeat-like superfamily protein
15 Ahg892424 histone deacetylase 2C
16 Ahg943758 Nucleotidyltransferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression