| Annotation |
|---|
| Description | jgi|Araly1|332090|fgenesh1_pm.C_scaffold_8001433 |
| Sequence |
ATGGACCCAA GCATCAACAG CAGCAGAAGA CGGAGAATTG GAGGAACCGC AAGCTCTGTT TGGGAAACGA GAATGCAGAG CGACGAAGAA GTTAGTAATA ACGCCATTGT TCTTCATGTT ACAAACGAAG ACAAGACTTC TTCTACTAAG CAAATGAGCT TAAAGGAGGA AGCTTTAGGG GTTAATGGAA AGAGACGGAC TTGGAAGTCT AGAGCGTTCG ATGTGAAGAA CCAATCAACA CTTGAGATTG TTCGAGCCAA TTCTTTGAAG GTGACGAGGC CGAGATCAAT TGGTACTCCT CCGATGACGC CGAGGAGATC GTTGTCTAGT ACTGACACCA ATGATAAGAG TCCGAGTTTG TCGGTGGCGG CGAAGAAGGC GAGATCTGAA TCTGTAGAGG GGAATGAGAA GACTACTCCG GGTCGGGTTA AGAAGACACG ATCGGAAATA TGCACGACGA TCGTTAAAGC GGGTGAATTT GATTCAGTTG CGTTGAGGAA AGTGAGTTCA TTGCCAGCTC CTAATTCTGA GAAATCTGAT AAGAAAACAG AGCATGTAGT AAATGTACCG GAAGAGGAGA CTATCAATGA GAATTCGAAG ATCCCAGAGG AAGTCAAGGA GTTTGGTGTT TGTCAGGAGA TGATCGTATC TGCTAATTCG AACGAAGATG AGCGGATCAA TGATGGCGAT CACGAGGAAG ATGATGAAGA AGAGAAAGAA GAAGAAGTGG AGAAGAAGAG TGTTGATGTG AAAGAGATGA ATGTAGCCAA GGAGAAGAGA GTTGGTGTTG AGATTAAAAA GTTGAGTCAA TTCCAAAACA GAACATCTCC ATCTCCGTCG TCCGTTCTGA TGTGGAGAGA TGTATCAAGG TCGACGCTTG TGTTCGGCTT TGGGACATTC CTCATAATCT CTTCCTCCTA CGCCAATGAT CTCAATTTCA GCTTCATATC GGTGGTGGCG TACATGGGAC TCATCTATCT CGGCCTCATG TTCGTATTAA AATCACTGAT CCACAGGGGA ATGGTGGAGG AGGAGAGACA TAAAGTGGTT GGAGTTAGAG AGGAAGATGT CAAGAGGATG CTCAGACTCA TAATGCCTTA CCTCAATGAG TCTCTGCATC AACTCAGAGC TCTCTTCTCC GGCGATCCAT CCACCACCCT CAAGATGGGA GTGGTGTTGT TTGTCTTGGC CAGGTGTGGC TCTTCTATCA CTCTTTGGAA CCTCGCCAAA TTTGGAAATT TCTGGATGAG GAGATTCAGG GACGCATGGG AATCTTGCAA TCACAAAAAG GCGGTGGCTT TGGCGCTCTT CACCCTCGTC TGGAACCTCT CTTCCGTCAC TGCCCGTGTT TGGGCAGCAT TCATGTTACT AGTTGCCTTC AGATATTATC AACATAAGAT GATTTGGACG ACTGATCAAG CTGATGATGA TGATGATGAA AATGTAGTAG ACGAAGAAGA AGAAGAAGAA GAAGAAAAAG AACAATTAGG GCTTCTAATG GGCCCAAAAC GGGCCTTATT ACATAAACTA ATCAGCTTTC GTGAAATAAC AAATCGGAGA GAAGTTGAAA GCTTTACTTT TCCACTTTCA CGGTTGCACA CCGTCGCGGC ATCTCCACTC TTTCCTCTCA AAACTCAAAA TCACGATTTT GAGGTTCTCT CGCCTCAGGC GAACAAGTTT AAGATGAGCG TAGCAAGTGA TTCTCCAGTT CATTCATCAA GTAGTAGTGA CGATCTTGCT GCATTCCTTG ATGCTGAACT GGACTCTGCC TCAGATGCTT CTTCTGGACC CAGCGAAGAA GAAGAAGAAG CCGAGGATGA TGAAGAATCT GGGTTAAAGA GACGAAAGTT AGAGCATTTA GAAACTGTAG ACGAAGAGGA GATTGAGGAA GCATCCTCAA GTAAAGGTGA ATGCCAGCAC CCAGGATCAT TTGGGAATAT GTGTTTCGTC TGTGGACAAA AGTTGGAAGA AACCGGTGTT TCATTTAGAT ACATACACAA GGAAATGAGG CTCAATGAAG ATGAAATCTC CCGGTTGCGT GATTCAGATT CGAGATTCTT GCAACGCCAG CGGAAGTTGT ATTTAGTTCT CGATCTAGAC CACACGCTGC TTAATTCAAC CGTACTAAGG GACCTGAAAC CAGAGGAGGA ATACTTGAAA AGCCATACAC ATTCTCTTCA AGAACCTTTT GATTTTTTGT TAATCTCAGA TGTTTCCGGA GGCAGTCTTT TCATGCTGGA ATTTATGCAC ATGATGACCA AACTGAGGCC ATTTGTTCAC TCATTTCTAA AAGAAGCCAG TGAGATGTTT GTGATGTACA TATACACAAT GGGAGATAGG GCATATGCGC GACAGATGGC GAAGCTACTG GACCCCAAAG GAGAGTACTT TGGTGATCGG ATCATTTCTC GGGATGACGG CACAGTGAGA CATCAAAAGA GTCTAGATGT GGTGCTCGGA CAAGAAAGTG CTGTTCTGAT TCTTGACGAT ACAGAGAATG CGTGGCCAAA TCACAAGGAC AATTTGATTG TGATAGAGAG GTATCACTTT TTCGCTTCGA GCTGCAGACA GTTTGATCAC AAATACAAGT CTCTATCGGA GTTGAAGAGC GATGAGAGTG AACCAGATGG GGCACTTGCA ACAGTTCTGA AAAATGTGGA TAAAGACATA TCAAACAGAG ATGTTAGGTC AATGCTGAAA CAAGTGCGTA AAGAGGTACT CAAAGGATGT AAAGTAGTGT TCAGTCGGGT GTTCCCAACC AAGGCTAAGC CAGAAGATCA CCCTCTGTGG AAAATGGCCG AGGAACTGGG AGCCACCTGT GCAACGGAAG TGGATGCATC AGTGACACAC GTGGTGGCTA TGGATGTGGG AACAGAGAAG GCACGTTGGG CAGTAAGAGA GAAGAAGTAT GTGGTTCATA GAGGATGGAT AGATGCAGCT AATTACCTGT GGAAGAAGCA GCCAGAAGAG AAGTTCAGTT TAGAGCAGCT CAAGAAGCAA CAAGTAGCGG AAGAAGAGTG A |
| Length | 3021 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 17279869.. 17284837 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G58003.1 |
| Description | C-terminal domain phosphatase-like 4 |
| TAIR curator summary | Encodes a polypeptide that contains FCPH and BRCT domains. RNAi suppression mutant lines were generated, which displayed a range of phenotypic abnormalities, including: incomplete to no cotyledon expansion, slow growth, epinastic leaves or small inflorescences. |
| Alias | [CPL4][C-terminal domain phosphatase-like 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.24264 |
Ahg919579 | Endomembrane protein 70 protein family |
| 9.32738 |
Ahg332577 | DEK domain-containing chromatin associated protein |
| 30.5941 |
Ahg947531 | |
| 35.7911 |
Ahg482815 | Laccase/Diphenol oxidase family protein |
| 47.244 |
Ahg934126 | SU(VAR)3-9 homolog 5 |
| 48.0625 |
Ahg940012 | RING/FYVE/PHD zinc finger superfamily protein |
| 57.7927 |
Ahg947562 | RING/U-box superfamily protein |
| 63.2772 |
Ahg940448 | nuclear matrix protein-related |
| 65.1153 |
Ahg475057 | Chaperone DnaJ-domain superfamily protein |
| 66.9925 |
Ahg474917 | Transducin/WD40 repeat-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|