Detail



ID : Ahg332760

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|332760|fgenesh1_pm.C_scaffold_8002103
Sequence
ATGTTCAAGG AAGCTGGCTT GAGAAGCTTA GGAGAGGATG TTGGTTCGAG GTGGACAATT GGTAATCGCA AATTGGATGC TAAGAAAACT GTTGCCAATT CTGGTCATGG TTTTGGATTC AAGAGTGCTC CTCCATTGTC GTCAGCAACT AAACACGCGA GAGGTAATAA CAGTGGTGGT TCAAGTTCAG ACATGGACAT TGCTTCTGAT TCAGATGAAG AGATATTCGA GAGGCAACAC TCTCCTCAAG ATTATAGAAT TCATGTTGGT TTGCCTCACG TGGCAGCTCA AAATGGACTT GGACGTAATG GTGCTAAGGT CTTTGGTGCT GCTGATGATT TATCAGACTC AGCTACAAGC ACTGAAGTTT CATATGAAGC AGAAGCTTGT GGTGTGCGGA ATAATATATC TTCGCATAAT GAATGTGAAA GAAGAAATGT TGAGGCTGGA ACTTCAGGAA GGACCCAGAA CGGGACTAGC ACTTCAACAA GTTCATTGCC TCGCTTTCCC ACCTTTCATG CGAGTGAGCA AGGTCCATGG TCTGCAATGA TTGCCTACGA AGCCTGTGTG CGGTTATGTC TTCATTCATG GTCAACGGAT AGTGTCAGCG AGGCTTCTTA CTTCCTGAAC AATGAATGCA CCATAATGAG GAATGCATTT AGTTTGCAGA GGTTTTTCCT TCATTCTGAA GAAGAGTTAC TGGGAAAGGG ACCTTCTGAG TTGGTTACCG AGACATCTGC TCCAAAATCT AAGAAGAATA TTGGAAAAAT TAGACTCCAA GTTCGTAGAA TTAAAATGGG ATTAGATCCA CCACCTGGTT GTAACATTGC AACACTGACG GTCTCCAAGG AAAAGCTCGA AGTTGTTCGT CAGCATATTG TGGAACTGAA TTCGACTTTA TCTTCTGGAT GGAAAGCAGC GAGGAAAGTT CATGTCACTC CCCAAGTTCC TCTAAATGGT TCACTTTCGC GTCAAAGTTT GGCTTACATG CAGGCTGCTG CTCGCTACCT TAAGCAGGTC TCAAAGGCCG TTAAAAACGA AATTGTTACG TCTCACACTG AACCGCAAAC TTATGAAGCA GTACAAGAAA CATATTCATG TTCATTGAGG TTAAAGAGCT CTGCTGAAGA TGATCAAATT AAGACGCAAC CTGGATCTGG CGAAACGTTT ATTTTCTTAC CAGATAGTCT TGGTGATGAT TTGATTATTG AAGTTCGAGA TTCAAAGGGG CAACTTCTTG GTCGTGTCGT AGCTCAGCTA GCAGCTATAG CTGATGATCC GCAGAGTGAA AAACTGCGAT GGTTGCCAAT ATATCATGAA CCAGAGCATG AACTAATTGG GAGAATCCAA CTTAGTTTTA GTTACTCAAG TAGTTTAGAT GAAAAAACAA AGTGTGGGTT GGTGGCAGAA ACTTCAGCGT ATGATCTTGT CCTAGAGGTG GCTATGAAAG CAGAACGATT TCAGCGAAGA AATTTATTGT TTAAGGGCCC GTGGCATTGG ATGATAACTC GATTTGCATC CTATTACGGG GTTTCAGATG CATACACTAG ATTAAGATAT CTTTCTTATG TCATGGATGT CACATCGCCT ACCAAGGACT GTCTTGATCT GATACATGAT TTTCTATTCC CTATTTTAAT GACCAGCAAC CACAAGGCTG TATTGAGTCA TCAAGAGAAT CGATTACTTG GGGAAATTGA CGAACAAATT CAGCAGATTC TTGCTTCAGC ATTTGAGAAT TATAAATCAC TTGATGAACT GTCTTTCTCC GGGATGAAAG ATGTTTTTGA GTCTGCTACG GGGACTCCAG CACCTGCTAT CGAATCAGCT GTCAAGCTCT ATGGTCTTCT CAACGATGTA TTAACCCCCG AGGCACAGTT GAAACTCTGC AGATACTTTC AGGCGGCTTC AAAGAAGAGG TCAAGAAGAC ATTTATTGGA AACAAACGAT TTACTTAACA ACCGTAGTGA AGGTGTACCA ATTGATCCCA TGGCGCTTCC AGCTTCTTAT CAAAAGATGA AGTCTCTAAT CTTAAGTCTT AAAAATGAAA TATCCACTGA CATAGCGATC CATAACTGCA ATGTGCTCCC AAGCTTTATA GACCTTCCAA ATCATTCAGC GGCAATATAT AGTGTTGATC TCTGCAATAG GCTCCGGGAA TTTCTTCTCG TATGGCCTCC TCCTGGACCA TCACCTGCGG TTGTTGATCT AGTTATTACA ACTGCTGACT TTCAGAGAGA TATCTCTAGC TGGAACATAA ATCCTATTAA AGGTGGCGTT AATGCCAAGG AGCTTTTCTA TTCATATATC ACAACCTGGA TTGAAGAGAA AAGACGAGTT TTATATGAAC TCTGTAAGCT AGAGACGTCA AAAGCATGTG GCGAGATACC GGGATTGACT TCTCCTTTTG TCGATGAGAT GTATGAGAGA CTCAATGGGA CACTTGATGA ATACGATATC ATCATTAGGC GTTGGCCAGA ATACGCAATA TCCTTGGAGA AAGTTGTAGC AGACGCAGAG AAGGCAATAG TTGAAGCCAT GGAGAAACAA TTTACTGAGA TTTTATCTCC GTTAAAGGAA AGTAAAATAT TTGGCCTGAA AATTGTCAAG AAATTCACCA AAGGCACACC TAATCCTTAT TCTGTTCCAA ACGAGCTTGG AGTTCTTCTC AACTCAATGA AAAGAGTGCT TGACATTTTA CGCCCGAGTA TAGAGAACCG ATTCAAATCT TGGAATTCAT ATATCCCTGA TGGAGAAAAC AGAGTCTTGG GAGAGCGGTT AAGTGAGGTG ACAGTATTGT TAAGATCCAA ATTCAGAAGT TATATGCAAG CGCTTGTGGA GAAACTTGCA GAGAATACGA GGATACAAAG TCACATGAAG CTAAAGAGCA TCATCCACGA CTTAAGGGAA ACCACAGCAG AACCGGATGT TAGAAACAGA ATGACAGCAT TGAAGGATTT GCTAGACAAA ACCATCGATC ATCTACACGG TGTTTTCTTA CCCGATGTGT TTGTATCAAT CTGCAGAGGA ATTTGGGACC GAATGGGACA GGATGTGCTT CGTCTTTTGG AGGATAGGAA AGATAATGTG ACTTGGCACA AAGGCCCGAG AATCGCAGTT TCTGTTTTAG ATGAGATCTT TGCGACACAA ATGCAAAGCT TGCTTGGAAA CGCTTTGAAG CCAGAGCACT TGGAGCCACC GAGATCGATG ATGGAACTCA GGTCTATGCT ATGCAAAGAT TCTACGGATT ACAGAGAAGG AGGCTACAAC TACTAG 
Length3276
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20609391.. 20614331
Download Sequence
A.thaliana
AGI-codeAT5G65440.3
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
15.6525 Ahg470420 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
17.1464 Ahg495608 microtubule-associated proteins 65-1
23.2164 Ahg930445 topoisomerase II
27 Ahg481676 Protein of unknown function (DUF707)
30.9677 Ahg470145 Eukaryotic aspartyl protease family protein
31.749 Ahg495451 CBS domain-containing protein
33.8821 Ahg490240 xyloglucan endotransglucosylase/hydrolase 9
37.9473 Ahg486978 RHO guanyl-nucleotide exchange factor 7
40.4722 Ahg497111 Gamma interferon responsive lysosomal thiol (GILT) reductase family protein
40.9878 Ahg934372 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression