| Annotation |
|---|
| Description | jgi|Araly1|930445|scaffold_302902.1 |
| Sequence |
TCTCTCTCGG AAACACCCAA CCATGGCTAC CAAACTCCCT CTTCAAAACA GCAACAACGC CAATGTTGCG AAACCTCCGC GAGGCGCCGC CGCCGGGAAG ACGATCGAGG AAATGTATCA GAAGAAATCG CAGCTTGAGC ACATTCTGCT CCGTCCCGAT ACATACATCG GATCGATTGA GAAACACACC CAAACGCTTT GGGTTTATGA GAAAGATGAG ATGGTGAATC GTTCTGTTAC CTATGTACCT GGATTGTATA AGATCTTTGA TGAGATTCTT GTGAACGCTG CTGATAACAA ACAGAGAGAT CCGTCGATGG ATTCTGTTCA AGTTGTGATT GATGTTGAGC AGAATCTGAT TAGTGTTTGT AACAGTGGAG CTGGAGTTCC TGTAGAGATT CATCAGGAAG AAGGTATTTA TGTACCGGAG ATGATATTTG GTCATTTGTT GACGAGTAGT AACTACGATG ATAATGTGAA GAAGACCACT GGTGGAAGAA ACGGATATGG TGCTAAGCTT ACTAATATTT TTTCTACTGA ATTCATCATT GAGACTGCAG ATGGGAAGAG ACTCAAGAAG TATAAGCAGG TCTTTGAGAA CAATATGGGG AAGAAGTCGG AACCAGTTAT AACAAAGTGC AATAAGAGTG AAAACTGGAC GAAGGTTACA TTCAAACCAG ATTTGAACAA GTTTAGCATG ACTGAATTAG AAGACGATGT GGTTGCTCTA ATGAGTAAGC GAGTGTTTGA TATTGCTGGA TGTTTGGGGA AGTCTGTCAA AGTTGAGCTG AATGGGAAAC AAATACCAGT GAAGTCATTT ACTGATTATG TTGATCTATA CCTAAAAGCA GCTAATAAGT TAAGGGCGGA TCCCGATCCT CTCCCAAGGA TAACTGAGAA AGTTAATGAC AGATGGGAGG TTTGTGTGAG CTTAAGTGAA GGACAGTTTC AGCAGGTCAG CTTTGTCAAC TCCATAGCAA CAATCAAGGG TGGTACACAT GTTGATTATG TGACGAGTCA GATCACAAAC TATATTGTGG GTGTTGTGAA CAAAAAGAAT AAAAACGCTA ATGTTAAGGC CCATAATGTG AAGAACCATC TGTGGGTCTT TGTTAATGCA TTGATTGACA ATCCTGCTTT TGATTCTCAA ACAAAAGAAA CACTGACTCT TCGACAGAGC AGTTTCGGGT CGAAATGTGA ACTTTCAGAA GATTTTCTGA AGAAAGTTGG AAAATCTGGC GTAGTGGAGA ATTTGCTTTC ATGGGCAGAT TTCAAGAAGA GCAAAGATCT AAAGAAAAGT GATGGAGCCA AAACAGGGAG GGTTGAAGTT GAGAAGTTAG AGGATGCCGC CGAAGCTGGA GGGAAGAACT CTCGACTCTG TACGTTGATT TTGACTGAAG GAGACTCAGC CAAACCTCTA GCTCTGGCGG GGAGGACTGT CTTGGGTGAG AACTATTACG GTGTGTTTCC GCTTCGAGGA AAGCTATTGA ATGTCAGGGA AGCCAGCACC ACTCAGATTA CAAACAATAA GGAAATTGAG AACATCAAGA AGATCCTTGG ACTAAAGCAA AATATGAAGT ACGACAATGT TAGCTCATTA AGATATGGCC ATATGATGAT CATGACTGAT CAAGATCATG ATGGTTCCCA TATAAAGGGG CTCTTAATCA ATTTTATCCA CTCTTTCTGG CCGTCGTTAC TCAAGGTTCC ATCATTCCTG GTTGAGTTTA TAACACCCAT TGTGAAGGCT AAGAATAAGG CTAAAAAAAA AGTTCTGTCA TTTTACTCAA TGCCTGAGTA CGAAGACTGG AAAGAAAGTA TGAAGGGTAA TGCAACCGGA TGGGAAATCA AATACTACAA GGGGTTGGGT ACAAGTACAA CTGAGGAGGC CAAAGAGTAC TTTAAAAATC TTGGTCTTCA CAAAAAGGAT TTTGTTTGGG AGGATGAACA AGATGGAGAA GCCATTGAAC TTGCTTTCAG TAAAAAGAAG ATCGAAGCCC GAAAAAATTG GCTTTCGAAC TATGTGCCTG GCACTCATCT TGATCAGAGA GAACCAAAAG TTACGTACAG TGACTTCGTG AACAAAGAAC TGATCTTGTT CTCCATGGCG GATCTTCAAC GGTCAATTCC CTCAATGGTT GATGGGCTCA AACCGGGTCA GAGAAAGATA CTTTTCACTG CATTCAAGAA AATCGTAGTT AAAGAAATGA AGGTTGCCCA ACTCGTGGGT TATGTATCAT CTATGTCAGC TTATCATCAT GGAGAGCAGA GCCTTGCCAG TGCTATCATA GGCATGGCGC AGGATTACGT GGGCAGCAAC AATATCAACT TACTTCAACC AAATGGTCAA TTTGGTACAC GAAATTCGGG TGGAAAAGAT GCAGCTAGTG CAAGATACAT TTTCACTATT CTCTCTCCAG TAACAAGGAT CTTGTTTCCC AAGGATGATC ATATCCTTCT TGATTACTTG AATGAAGACG GGCAATCGAT AGAGCCAACT TGGTACATGC CCATCATTCC AACTGTACTT GTCAATGGCT CTGAAGGCAT TGGAACTGGG TGGAGCACGT TCATACCAAA CTATAACCCT AGAGAGATTG TTGCTAATGT AAGGCGTCGA CTTAACGGTG AAAGTATGGT GCCTATGGAT CCTTGGTATA GAGGTTTTAA AGGAACAATT GAGAAAACTG CGTCAAAAGA AGGTGGTTGT ACCTACACAA TCACTGGTCT ATATGAGGAG GTTGATGACG CAACTATTCG AATTACGGAG TTGCCAATCA GAAGGTGGAA TGATGATTAT AAACAATTCT TGCAGTCATT GAAGACAGAT AGTGGTGCCC CTTTTTTCCA GGATGTCAAG GCTTACAATG ATGATAAATC TGTTGATTTT GACCTTATTT TGAGTGAAGA GAACATGCTG GCGGCTCGGC AAGAGGGCTT TCTGAAGAAA TTCAAACTCA CCACGACAAT CGCTACAAGT AATATGCATC TCTTTGATAG AAAGGGTGTC ATAAAGAAAT ATGCGACTCC AGAACAAATC CTTGAAGAGT TCTTTGAACT CAGGCTTGAA TACTATGAGA AGAGAAAGGA AACCATGTTG AAGAATCTGG AAATTGAGCT GTTGAAACTA GAAAATAAAG TGCGGTTTAT TCTTGGAGTT CTCAGTGGAG AAATCATAGT GAACAATAGG AAGAAAGCCG ATATTGTTGA GGACTTAAGA CAGAGAGGGT TCACACCATT TCCGAAGAAG GCCGAGTCTG TCGAAGCTGC AGTTGCTGGA GCAGTTGATG ATGCAGCTGA AGAATCTGAA GAAATCTTAG TGGATCCTGA ATCAAGCTCC ACTTATATAC CCGGCTCAGA ATATGACTAC CTATTGGCAA TGGCTATAGG TTCGTTGACT ATAGAGAAAG TTCAGGAGTT ATTAGCAGAC AGAGATAAAA TGATTATAGC AGTTGAAGAC ATGAAAAAAC ACACACCGAA ATCCCTCTGG CTCAGAGACC TAGAGTCTCT TGACAAGGAA CTAGATAAAC TTGATCGGAA AGATGCTAAA GCCGAAGAGG AAAGAAAGGC AGCACAGGAA AAAATCAGGA AGAAATCTGG AGCACCAGTA AAGGTTAAAA GGCAGGCACC AAAGAAACCA GCACCAAAGA AGACCACAAA GAAAGCCAGT GAATCTGAAA CAACAGAGTC TTCCTATTCA GCAATGGACA CAGATAACAA CGTAGCAGAA GTGGTGAAGC CAAAAGGTAG ACAACCAGCA AAGAAGAAGG CTCCAGCTGC AAAGGAGGTT GAAGAGGATG ACATGTTGGA TCTAGCACAA CGGCTTGCTC AATACAACTT CGGCTCAGCA CCTGCGGAAT CAAGTAAAAC AACTGAAACA TCGAAAGCAA TTGATGTGGA TGACGATGAT GATGAGGTAG TTGAGGTTGC ACCAGCAAAG AAAGGAGGAA GAAAACCTGC GGCAAGTAAA GCTGCAAAAC CACCAGCAGC TCCGAGGAAG CGAGGGAAGC AGACGGTTAC TTCAACAGAG GTTGTGGCAA TTGGTGTGTC CCCGGAGAAG AAAGTGAGGA AGATGAGATC ATCTCCGTTT AACAAGAAGA GTAGTTCAGT GATGAGCAGG TTGGCTAATA ATAAGGAAGA GGAGAGCAGC GAGAATGTGG CTGGAAACTC ATCGTCGGAG AAATCTGGAG ATGTTGCTGC GAAATCGAGG CCTCAAAGAG CGAATAGAAG GAAAATGACT TATGTGTTGA GTGATTCTGA GAGTGAATCT GCGAATGATT CTGAGTTTGA TGACATTGAA GACGACGAAG ATGATGAGTG AGTAGAGTGA GAGAGAACTA A |
| Length | 4341 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 10493691.. 10499661 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G23890.1 |
| Description | topoisomerase II |
| TAIR curator summary | Encodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues. |
| Alias | [ATTOPII][TOPII][topoisomerase II] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.82843 |
Ahg481360 | early nodulin-like protein 14 |
| 8.544 |
Ahg472662 | MLP-like protein 423 |
| 10.5357 |
Ahg920750 | Pathogenesis-related thaumatin superfamily protein |
| 11.4891 |
Ahg491553 | early nodulin-like protein 15 |
| 11.6189 |
Ahg482818 | glycerol-3-phosphate acyltransferase 6 |
| 12.7279 |
Ahg470351 | targeting protein for XKLP2 |
| 13.4164 |
Ahg485860 | histone H2A 11 |
| 14.0712 |
Ahg485528 | inflorescence meristem receptor-like kinase 2 |
| 14.4914 |
Ahg358455 | |
| 16.1245 |
Ahg493473 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|