Detail



ID : Ahg334084

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|334084|fgenesh1_pg.C_scaffold_1000649
Sequence
ATGGATTCCG ATGCGAGGAG TAAAATTAAC TCCACTCAAG GTTCGTCCCA TTCTCCGAAG CCATCCAAGT TCTCTGTGTA CCGGAACCCT GCTCTCGCCG CCGCTTCCAC CGCCAACAGC CTCCGTCCCT CGAAATCCGT TCTTCTATTC ATATTCTTGC TCTCTACCGC TTCCGCTTTC TCTCTCATCT CCTTCATGGC CGGGGAGAAA TGGTTGACCA ATGCTTTAAC ATTCGGGAAA ATATCCCAAG AGGCAGCTTA TGTCACTGTA AAGGCGTGGC AGGGGCTGGT GACTTTGTTT TGTATTGGAG CAATGATGGC TTTGTCCAAA GGCATATCTC TGCACAGAGC AAAGTTTGCT GCTCGAGGAG AAACTAAATC TTCCTCTAAA GAAACCAAAG ATCAGTTTTC TCTATCAAAT CGTCAGCTTG AACTTCTTGG GATAAAGAAA AAAGCTGACC AGAATGTATC AGATTTTCCA AACAGTCGTC CTGCATCGAA ACCTTCACAG TCATTGGAGC CGCTTGTCCC AATACATCAT CTAACTCTTA CTGGTTCAGC TCATAAGTCT TCTGGTGGTG GTGATAAGCT GAATTCCCGT ACAGGAAACC AGATTAGTTC GTTTAGCACT CCCTCAAAAC AAATGGGTTC ACCGTCTATG TATCTTGTCC CTTCTAGCTC ACCAGTTTCT TCTAATCATG CTTCTTCTGG TCAGGATAAG GCTGTTTCTA GTCCTTGGTC TGGTAGACGA AGTTCTACAA AAGACATAGC TACCGAGGAG CAGCTTGAGC AGCTTTTGGC TGAAATAGAT GAGCCAATCA CTGAGTCGGC TGGGAAGATG CGTACGCCTC CACCAACAGT TGGGAGTTTC GCCATGGCTA GCCCGAGTAC AGTTGGTGTT CAACTGGTGC ATCTGGGACT ACAGAGTACA CCACTAAGAC CTGTCAGGAT GTCTCCTGGT GCTCAGAAAT TTACGACTCC CCCAAAGAAA GGAGAGGGTG ATTTCCCCAA CCCAATGTCC TTAGAAGGTG CTATCGAAGG TTTTATTCAT CTAGGTGTCT ATCCTCAGAT AGAAGACTGG CGTGACCGAC TAAGGCAATG GTGTTCCTCC GTGTTGCTCA AACCTCTGCT TAACAAGGTT GAAACCAGTC ATATTCAGGT AATGCAAACG GCATCAAAGC TTGGTGTTAA TGTCACAGTT AGTCAAGTTG GAAGTGATTT GCCAACAAAT GGAACCGCTA CAACTGCCTT ACCGGTTGAT CGAACGAAGG GGTGGCAGCC ATCTTACTCT CTCGATGAAG ATGCTCTTCT TCATCAATTA CGCGCTAATC TTGTACAGGC TATTGATGCT TCCATGCAAA AGCTGCGTAC AGAGAACCAG CAGTTTCAGC AACAGCAACA ACAACAGCAA GCGGCACTAA TCCCTGTCAT GCAGGAATGT GTTGATGCTA TAAGTGAACA TCGGAGGCTT CAGGGCTTAA TGAAAGGAGA GTGGGTTAAG GGCCTACTTC CACGCAGCAG TATTCCAGCA GATTACACAG TGCAAAGAAT CCGAGCACTC GCGGAAGGAA CTTGTGTGAA GAACTACGAA TACAATGGAA GGGCAGATAC TCGTGAGAGA AACAAGAAAT GGAGCCTGGA GCCTCCAACC GATTCTCATC TGCTTCTGTA CTTGTTTTGT GCCTTCTTGG AACACCCAAA GTGGATGTTG CATTTGGACC CTAGCTCTTA CACAGGGACT CAGGCAAGCA AGAACCCTTT ATTCTTAGGG GTTTTGCCTC CAAAAGAGAG ATTCCCAGAG AAGTACATTG CTGTGGTATC GGGTGTACCT TCGACACTAC ATCCTGGTGC ATGTGTGCTT GCGGTAGACA AGCAAAGCCC ACCCACATTT GCCTTGTACT GGGATAAGAA AGTGCAGTTT ACTCTTCAGG GAAGAACAGC ACTATGGGAC TCTATGTTGT TGATATGCCA CAGAATCAAG GTGGGATACG GAGGTGTTGT TCGTGGGATG AATCTGGGTT CTTCAGCACT TAACATCCTC CAAGTTGTTG ATTCGGATAC TGACGATTAA 
Length2070
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2787156.. 2790084
Download Sequence
A.thaliana
AGI-codeAT1G07970.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
23.4734 Ahg495104 Pentatricopeptide repeat (PPR-like) superfamily protein
23.6854 Ahg487923 L-Aspartase-like family protein
27.0555 Ahg491350 Vacuolar import/degradation, Vid27-related protein
37.0945 Ahg942385
42.9651 Ahg943494 poly(ADP-ribose) polymerase
46.594 Ahg473392 early-responsive to dehydration stress protein (ERD4)
49.1427 Ahg934367 Ribosomal protein L11 family protein
56.8683 Ahg346338 Leucine-rich repeat protein kinase family protein
57.0088 Ahg494345 Minichromosome maintenance (MCM2/3/5) family protein
57.2975 Ahg480858 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression