Detail



ID : Ahg943494

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|943494|scaffold_604038.1
Sequence
TTCTCCAGAA GAAGACGAAA ATGGCGAACA AGCTCAAAGT TGACGAACTC CGTTCAAAAC TCGCCGAGCG TGGACTCAGT ACTACCGGAG TCAAAGCCGT TCTGGTGGAG AGGCTTGAAG AAGCTATCGC AGAAGACACT AAGAAGGAAG AATCAAAGAG CAAGGGGAAA AGAAACCAAG ATTCTTCGGA TGATACTGAA GAATCGAACA AATTGATTGC AATTGGCGAA TTTCGTGGAA TGATTGTGAA GGAGTTGCGT GAAGAAGCTA ATAAGAGAGG CTTAGATACA ACGGGAACCA AAAAAGAACT TCTTGAGAGG CTTTGCAATG ATGCCAATAA CGATTCCAGT GCACCAGTCA AATCCGGGAC AGATGGAGCT GAAGATGACA AAAATGGCTT TGAAGAAGAA AAGAAAGAAG AGAAAATCGT AACCGCGACA AAGAAGGGTG CTGCGGTATT GGATCAATGG ATTCCTGATG AGATAAAGAG CCAGTACCAT GTTCTACAAA GGGGTGATGA TGTTTATGAT GCTATCTTAA ATCAGACAAA TGTCAGGGAT AATAATAACA AGTTCTTTGT CCTGCAAGTC CTAGAGTCGG ATAGTAAAAA GACATACATG GTTTACACCA GATGGGGAAG AGTTGGTGTG AAAGGACAAA GTAAGCTAGA TGGGCCTTAT GACTCATGGG ATCGTGCAAT AGAAATATTT ACCAATAAGT TCTGTGACAA GACAAAGAAT TATTGGTCTG ACAGAAAGGA GTTTATCCCT CATCCCAAGG CCTATACATG GCTCGAAATG GATTACGGAA AAGAGGAAAA TGATTCACCG GTCAATGATA TTCCTAGTTC ATCTTCCGAA GTTAAACCTG AAAATTCAAA ACTTGATACT CAGGTTGCCA AGTTCATCTC TCTTATATGT AATGTCAGCA TGATGGCACA ACATATGATG GAAATAGGAT ATAATGCTAA CAAATTGCCA CTCGGCAAGA TAAGCAAGTC GACAATTTCA AAGGGTTATG AAGTTCTGAA GAGAATATCG GAGGTGATTG ACCGGTTTGA TAGAACGAGG CTTGAGGAAC TGAGTGGAGA GTTCTATACT GTGATACCCC ATGATTTTGG TTTTAAAAAA ATGAGTCAGT TTGTTATAGA CACTCCTCAA AAATTGAAAC AGAAAATAGA AATGGTTGAA GCATTAGGTG AAATTGAACT CGCAACAAAG TTGTTGTCGG TCGACCCGGG ATTGCAGGAC GATCCTTTAT ATTATCACTA CCAGCAACTT AATTGTGGTT TGACGCCAGT AGGAGCCGAT TCAGAGGAGT TCTCTATGGT TGCTAGTTAC ATGGAGAACA CTCATGCAAA GACGCATTCG GGATACACGG TTGAGATTGC TCAACTTTTT AGAGCTTCGA GAGCTGTTGA AGCTGATCGG TTCCAACAGT TTTCAAGTTC GAAGAACAGA ATGCTACTCT GGCATGGGTC ACGTCTCACT AATTGGGCTG GTATATTATC TCAAGGCCTG CGAATAGCTC CTCCTGAAGC ACCTGTAACT GGTTACATGT TTGGAAAAGG TGTTTACTTT GCTGATATGT TCTCCAAGAG CGCGAACTAT TGCTACGCTA ACACTGGTGC TAATGATGGC GTTCTGCTCC TCTGCGAGGT TGCTTTGGGA GACATGAATG AACTTCTGTA TTCAGATTAT AATGCCGATA ATTTACCCCC GGGAAAGCTT AGCACAAAAG GTGTGGGGAA AACAGCACCA AACCCATCAG AGGCTCAGAC ACTAGAAGAC GGTGTTGTTG TTCCACTTGG CAAACCAGTG GAACGTTCAT GCTCCAAGGG GATGTTGTTG TACAACGAAT ATATTGTGTA CAATGTGGAA CAAATCAAGA TGCGTTATGT GATCCAAGTC AAATTCAACT ACAAGCATTA AAACTTATGT AATTCATAAT A 
Length1951
Protein Sequence
Protein Residue
Map Locationscaffold_6: 22274805.. 22278646
Download Sequence
A.thaliana
AGI-codeAT4G02390.1
Descriptionpoly(ADP-ribose) polymerase
TAIR curator summaryEncodes a DNA dependent nuclear poly (ADP-ribose) polymerase (E.C.2.4.2.30), thought to be involved in post-translational modification .
Alias[APP][PARP2][PP][poly(ADP-ribose) polymerase][poly(ADP-ribose) polymerase 2]
Gene coexpression
MR
MR Locus Description
10.247 Ahg482608 Protein kinase superfamily protein
14.0712 Ahg496223 CAAX amino terminal protease family protein
15.4272 Ahg483068 HXXXD-type acyl-transferase family protein
18.6548 Ahg919092 myosin XI B
20.4939 Ahg323324 RNA helicase, ATP-dependent, SK12/DOB1 protein
25.4558 Ahg919413 RNA-binding (RRM/RBD/RNP motifs) family protein
25.923 Ahg321659 Nucleotidyltransferase family protein
27.0185 Ahg933675 poly(ADP-ribose) polymerase 2
30.1993 Ahg472211 Zinc finger C-x8-C-x5-C-x3-H type family protein
32 Ahg905735 formin homology 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression