Detail



ID : Ahg335030

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|335030|fgenesh1_pg.C_scaffold_1001595
Sequence
ATGGATTATA ACTCAGATCG TGGTTATGAT GACTCTGAAC AATTACAACC ATCGGATTAT GAAGTGGAGA CCTTTGATGA CCGGAGGAAC GGTGGTGCAG CCGTTGATAC TGGTGGGATT CAGATGAAGC ATTCCATTGA GCATCGTTAT TCGTCTTCAT CCATGTCTTC TCCTGGGAAA CTATTCGTAG GTGGAGTTTC GTGGGAAACA ACTGAAGAAA CTTTTGCGAA TTACTTTGGA AAGTTTGGAG AAGTTGTCGA CTCTGTAATC ATGACAGATA GAATAACTGG AAATCCAAGG GGATTTGGGT TTGTCACTTT TGCTGATTCA GCTGTTGCAG AGAAAGTTTT GGAGGAAGAG CATGTAATAG ATGAGCGGAA GGTTGATCTG AAAAGGACAG TTCCTAGAGG GGACAGGGAT ACCGATATCA AAGCGGTATC AAAGACCAGG AAAATCTTTG TTGGTGGACT TCCACCACTT TTGGAAGAAG AGGAACTGAA AAATTATTTC TGTGTATATG GTGACATAAT CGAGCATCAG ATCATGTATG ACCACCACAC GGGAAGGTCG AGGGGATTTG GTTTTGTAAC CTTTCAGACT GAAGATTCTG TTGACAGACT TTTCTCCGAT GGAAAAGTGG ACATAAAAAG GGCCGAACCA AAGAGAACCG GGAGAGATAA CAGCTTTCGA TCCTATGGTG CTAGTGGCAA GTATGATCAG GAAGATTGTT ATGGTGGGAA AGCTAATGAA GATTACAATA TGTATTCGGG TTATGGTGGT TATGGCGGTT ATGGAGCCTA CGCAGGGAAT CCCATGGTTA ACGCTGCTGG ATTTTATGGT TACGGTGGTG GGTATGGCTA TGGTTATGGC TATGGAGGTC AAATGTTCAA CATGGGCTAT GGAGCTGGCG GTTATAGCCA TATGGGTGGT GGCTACGGTG TTGCTGCGGC TGCTGCTTAT GGAGGTGGAA AAGCTCATGG AAACGGAAAC AGCGGCTCAA GTAGTGGCAA AGGAAATGGG ACTAATGGTT CTGGGCCAGC TCGATACCAT CCTTATCAAA AGTAA 
Length1065
Protein Sequence
Protein Residue
Map Locationscaffold_1: 7052786.. 7054345
Download Sequence
A.thaliana
AGI-codeAT1G17640.1
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
21.5407 Ahg354720 Transcription factor TFIIE, alpha subunit
51.9904 Ahg491276 Leucine-rich repeat (LRR) family protein
56.116 Ahg936504 Protein of unknown function (DUF707)
63.9844 Ahg490568 ARM repeat superfamily protein
67.9706 Ahg477936 DNAJ heat shock N-terminal domain-containing protein
69.5989 Ahg490016 YTH family protein
75.2197 Ahg486460 Peptidase family C54 protein
84.5872 Ahg473739
92.2226 Ahg942918 Nuclear transport factor 2 (NTF2) family protein
96.3639 Ahg905690
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression