Detail


ID : Ahg473739

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473739|fgenesh2_kg.1__3693__AT1G42440.1
Sequence
TTTAAACTTT AAAGCAGTCA CCAAATCCAG CGAAGCCATG GGACGCTCTC GAGTTCAAGT TAACAAAGCT CACAAGACAC GTTTCTCCTC TAAATCTTCT CGCAATCTCC ACAGGACTTC CCTCCAAGAT AGCAACCGGA TTGGGAAATC GGATAACAAC TATGTTAAAG GTGCTAAAGC TGCTCGTGTT CAGCGTGGAA AGATGATTCG AGAGCAGAAA AGAGCAGCAG TTTTGAAGGA GAAGAGAGCA TCAGGAGGAT TACACAGTGC TCCTCGTGTT ATCGTTTTGT TTCCTCTCTC TGCTTCTGTG GAATTGAATT CACTTGGTGA AGATGTTTTA AAGCTATTGT CTTCTGATGG TTCTGGAAAT TGTTCTTCAA CAGTTGCATC TTCTGAGTAT AAGCTAAGAG CAACTGTCTT AAAGGCCCCT CACGGAGATC TTCTGACATG TATGGAAATG GCCAAGGCAT GTGAATTATT GTTTACGTTT GTTGGTTCTT TCCGCGAGGA GAGTTTGTCA CAGGTTGCTG ATTTGATGGC TTTTGTTGCA TCTGCAAGCG CTCCGTGGGA AGAGAATAGC TCTAACTTCA TAGATTCATT TGGAAGTCAG TGTCTTTCTG TGTTTAGATC AATTGGTTTA CCAAGCACCA CTGTGTTGAT CCGTGATTTA CCTAGTGATG TGAAAAAGAA AAATGAGATG AAAAAGATGT GTGCCTCTCA ACTTGCTTCT GAATTTCCCG AGGATTGTAA GTTTTATCCA GCAGATACCA GAGATGAGTT GCATAAGTTT ATGTGGTTAT TCAAGGCACA AAGGCTTACC GTACCTCACT GGCGAAGTCA ACGACCATAT GTTGTGGCTC AGAAGGTTGG GATGCTGGTG GATGATGAAA GCTCAGGAAA GTGCACTCTA CTTCTCTCTG GTTACTTGCG TGCTCGCAAA CTGTCTGTAA ATCAGCTGGT CCACGTTTCT GGCGTTGGTG ATTTTCAATT CTCCAAAATT GAAGTGCTGA AGGATCCATT TCCTTTGAAT GAAAGGAAAA ATCAGAATTC CATGGAATTA GATGCTTCAC ATGATGAAGA GGTGTTGAAG TCTCTGGTTC CTGATCCCAT GAAACAAGAG CCTTTAGTAG TTGAAAACAT TCCAGATCCT TTAGCAGGGG AACAGACATG GCCAACAGAG GAAGAAATGG CTGAGGCTGA CAAAATTCAG AAACATGGAA ATGTAAAGAA GAAGACTTTG CCGCGAGGGA CTTCAGAATA TCAGGCTGCT TGGATTGTGG ATGACACAGA TGAAGAGGAT TCCGATAATG GTGATTCCGA TGATAACGGC ATGGTGTTGG ATAGAGGAGA CGAATCCAAT CAAAAAGGAA GGTATGACCA AGAATTTGAG GATGATGAAA AATCACTGAA CCTGCGTGAT ATTGATACTG AAACTCAGAA TGAATCGGAA ATGATGGACG ATGAAGACTT GACAGAGGAA CAAATTAAGG ATGAAATCAA GAAAATCAAA GAGGCATATG CTGAGGATGA GGAATTTCCA GATGAAGTAG AGACTCCCAT TGATGTTCCT GCAAGAAGAC GTTTTGCAAA GTACAGGGGT CTGAAATCCT TTAGAACCTC CTCGTGGGAT CCAAATGAGT CTTTACCTCA GGACTATGCC AGAATTTTTG CTTTTGATAA TGTCGCCAGG ACTCAAAAGC TTATGATTGT GTACCAACTT GGGTCATATG TACGGCTGCA TATTAAAGAA GTGCCTCTTG GTGCTGCCTC TAAACTATCC TCCCTTGTGA ACACAACGAA ACCCATTATA GGATTTGGGC TTCTGCAGCA TGAATCCAAG ATGTCGGTTC TGCATTTTAG CGTAAAGAAG TATGATGGTT ACGAAGCTCC TATTAAAACA AAAGAAGAGC TTATGTTCCA TGTTGGTTTC CGCCAATTCA TTGCAAGGCC GGTATTTTCA ACCGACAATT TCAGCTCAGA CAAGCACAAG ATGGAGAGAT TCCTGCATCC AGGGCGTTTC TCGTTGGCTT CAATATACGG TCCAATATCT TTCCCACCAC TTCCTTTGGT TGTTCTGAAG ATTTCTGAAG GGTCGGATGC TCCTGCCGTG GCTGCCCTTG GTTCCTTGAA AAGCGTAGAC ACCAACAAAA TAATTTTAAA GAAGATAATA TTAACTGGGT ATCCTCAGAG AGTGTCAAAG ATGAAAGCAT CAGTCAGATA TATGTTCCAC AACCCAGAAG ATGTGAAATG GTTCAAGCCT GTTGAAGTGT GGTCAAAATG CGGGCGTCGT GGTCGTGTGA AGGAGCCAGT GGGCACACAT GGGGCAATGA AATGCATATT CAATGGAGTG GTTCAGCAAC ATGACATAGT GTGCATGAAC TTGTACAAGC GCGCTTATCC CAAGTGGCCT GAACGTCTGT ACCCGCAGCT TCTCTGATTC AAATATATAA AATGAAGATG ATGATGTTCA AGTTTCTCTG ATTCTACTTT CGTAATTTAT GGTGGTGGTT TAGTTGAAGT CCTCCAGTTT TGTCCTGTAT GTGATAAAAA TATACAAGTT TTTTCCTTCA TTGCTCACAA TACAT
Length2585
Protein Sequence
Protein Residue
Map Locationscaffold_1: 20635021.. 20639721
Download Sequence
A.thaliana
AGI-codeAT1G42440.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.74166 Ahg936663 high mobility group
4.24264 Ahg894546 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
5.09902 Ahg485282 Pentatricopeptide repeat (PPR) superfamily protein
5.47723 Ahg495674 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
6 Ahg478789 heat shock protein 60-3A
7.2111 Ahg475156 DNA-binding storekeeper protein-related transcriptional regulator
9.16515 Ahg491591 Ribosomal L28 family
9.38083 Ahg316209 CCAAT-binding factor
9.69536 Ahg488658 MIF4G domain-containing protein / MA3 domain-containing protein
10.8167 Ahg490266 GTP binding Elongation factor Tu family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression