| Annotation |
|---|
| Description | jgi|Araly1|341316|fgenesh1_pg.C_scaffold_3001079 |
| Sequence |
ATGGATCCTC CTGTCTCGGA TCTTGAGAGT ATCGAAGATC AGAAAGAAGG AGGACCTTCC TTTCACTGTG ATCTTTACGA TACACAAGTA GTTCACAAGA TTGCTCAGGT TTTTCTCCCT GGATTAGCCA CTGCTTGTGT CGATAACACT ACCGGCGATA TCTTCAGGAG TCCTGGTTCT GTGGCTGCTG ACATTCGAAA AGAAATGATT GAGTACTTGA CTCGTAGAAG CGAAAGCTTT GTGGCTGAAC ACATTGTTCT TCAAGGTGGT TCTGAGATTG AAGCTTCTCA TGATCCTTTT GACATTATAT CTGATTTCAT CGATGATTTC GCAACTTCTA AGCGGAATTT GTTCAGCCGG GTTTCGGGTT GGATGCTTAG CGAAAGAAGG GAAGATAATA TAGATGATTT CGCGCAAGAG ATGGAGATAA GCGGCTTCTG GTTGACTGAT CATAGAGAAG GGATCGCTCA GACTTTGCTT AAAAACGTCG ATTTTAAAAG CAGTGCTCAT TGTGAGATGA AATTCCAAAC CGAGGGAGAA CTCGCGGAGC ATACCATGAG TTGTGGGTAT AGAACCATGA ACTGTGAGAA CGAGGGTTGC ACTGCGGTCT TTTGCGCGAA TCAGATGGAG AATCACGATT CAGTTTGCCC GTTCAAGAAT ATTCCGTGTG AGCAGAACTG CTCAGAGAGT ATCATGAGAC GAGATATGGA TAGGCATTGT ATAACCGTAT GTCCTATGAA ACTTGTCAAC TGTCCATTTC ATGCTGTTGG TTGTCTATCT GATGTGCATC AATGTGAGGC CCAACAACAT CATTTGGATA ATGTAAGCTC TCATTTGATG TACATTCTTC GGAGCATCTA CAAGGAAGCA TCTCCGGATG ATCTCAAACC CCGAACTGAA CAGATACAGC AGTTGTCTAC ACGGTTATCT GAAGCTCGTA ATGCAAGATC ACTAACGAAT CTGGTCAAGG AAATTGATGG AAAGCTGGGG CCTTTAGAAA TCAAACCAAA GATTGTTACT AACTTGGAGT CCGATAAACC TGAAAATACA GAAAAGGAAG CATTAGAAGA AGCTGAGATC AAAGAAAAAC CGGAAACAAG CAACTTAAAA GCTGGTACAT TGGAGCAAAC CGCGGAAGAT AAAGTGGTTT CAAAAGAAGT AAATGATGCA ATGGTGGAAG AAGCTGCAAA GAAAGTTTCA GAAGCTGAGA TAGCAGACAA TGTTAATGAA GAAGGAGAAT TAAAAGCGCA GAAGCTTTTA GAATTAGGCG AGTTCATAAA AGAAGGAGAC AACAACTCTG CAGATGATTT ATCAGAGAGA ACCGAAACCA AAGCTCCAGA AGTTGTGGTC ATGGATGAGG ATAGAGAGGA AGAGGAGGAG AGTGCAGAGA CAAAAGACTC AAGAACAAAT GAAACAACTA GAGGTTTAGA GATGATTGAT GAAGAGACAA AGAAATCGAC TGAAATTAAA ACCGAAGCTC CATCAAGAAT AGTCATGGAC AAAGAGGAGG ATGAAGAGAC GAAGAAATCA ACTGATACAG AAACCGAAGC TCCATCGAGA ATAGTCATGG AGACTGAGGA TGATGAAGAG ACAATGAACT CAAGGGCTCG TGCTTCTGAT GAAGCTGAAG CACTCTCAAA GAGCTCTCAA GGTTTTTCTA CGGTGCAAGC GGAAACCGTA CCCCATATGT CTTAA |
| Length | 1695 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 4545736.. 4547548 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G11950.1 |
| Description | TRAF-like superfamily protein |
| TAIR curator summary | publications Tian et al (2007) and Sadre et al (2006) refer to At3g11950. The prenyltransferase gene studied is actually At3g11945 which arises from a split of the previous At3g11950 gene model. |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 17.3205 |
Ahg492266 | C2H2-like zinc finger protein |
| 31.9374 |
Ahg931636 | NEP-interacting protein 2 |
| 54.1202 |
Ahg496280 | glucuronidase 1 |
| 79.5236 |
Ahg478517 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
| 85.6971 |
Ahg492924 | Protein of unknown function (DUF1218) |
| 95.184 |
Ahg327370 | transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|