Detail



ID : Ahg327370

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|327370|fgenesh1_pm.C_scaffold_6002590
Sequence
ATGTCGAACT GTTTGCAATT GAAACCGGCT TGTATGGGAT GTGGATCACA ATCCGATTTG TATGGAAGCT CTTGTAGACA CATGACGTTG TGTTTGAAGT GTGGTAGAAC CATGGCTGAG AATAAAGCTA AGTGTCTCGA TTGTGGAACC GTCCTTACGC GTTTGATTCG GGAGTATAAC GTTCGTGCTG CGGCACCGAC GGATAAGAAC TACTTCATTG GTAGATTTGT GACTGGTCTT CCAAATTTCA AGAAAGGTTC TGAGAATAAA TGGTCTCTTC GTAAAGATAT ACCGCAAGGT CGTCAGTTTA CCGATGCACA ACGGGAGAAG TTAAAGAACA AACCTTGGAT CTTGGAAGAT GAAACTGGAC AGTTTCAGTA CCAGGGACAT CTTGAAGGCT CTCAGTCTGC TACTTACTAT CTCTTAGTGA TGCAGAACAA AGAGTTTGTC GCGATTCCTG CTGGTTCTTG GTATAACTTT AACAAGGTTG CACAGTATAA GCAACTTACA TTGGAAGAAG CAGAAGAGAA GATGAAGAAT CGGAGAAAAA CTGCTGATGG TTATCAAAGG TGGATGATGA AAGCTGCGAA TAATGGTCCA GCGTTGTTTG GAGAAGTGGA TAATGACAAA GAGAGTGGTG GAAGCAGCGG AGGTGGTGGT AGGGGTCGTA AAAAGTCATC AGGTGGTGAT GAAGATGAAG GAAATGTCTC TGACAGAGGG GAGGAAGATG AAGAGGAAGA GGCATCTCGG AAAAGTAGAC TTGGACTTAA TAAAAAGAGT AATGATGATG ATGAAGAAGG TCCAAGGGGT GGTGATCTTG ACATGGATGA TGATGACATT GAGAAGGGGG ATGACTGGGA GCATGAGGAA ATTTTCACCG ATGATGACGA AGCAGTCGGT AATGATCCTG AGGAACGTGA AGATCTTCTG GCTCCTGAAA TTCCTGCTCC TCCAGAAATA AAGCAGGATG AAGATGATGA AGAAAATGAA GAAGAGGAGG GAGGGTTGAG CAAATCTGGT AAAGAGTTAA AGAAACTGCT TGGTAAGGCT AATGGTTTGA ATGAATCTGA CGAAGACGAT GATGACGATT CTGATGATGA GGAGGAGACA AACTTTGGTC CAGTTACGAA TTCAAAACAG AAGGAGGTGG CGAAAGAAGA ACCTGTTGAA AATGCACCTG CAAAACCTAC ACCATCTGGA CCTTCTCGTG GAACACCTCC TGCAAAACCA TCTAAGGGAA AGAGAAAACT AAACGATGGC GATTCTAAAA AGCCTAGCAG CTCTGTTCAA AAGAAAGTGA AGACTGAAAA TGATCCAAAA TCTTCGGTAA AAGAAGAGAG AGCAAACACA GTTTCCAAAT CCAACACACC AACAAAAGCT GTGAAAGCTG AACCAGCTTC AGCTCCTGCA TCATCATCCT CAGCTGCAAC TGGGCCTGTG ACTGAAGACG AAATCCGCGC TGTTCTGATG GAGAAGAAGC AAGTCACTAC ACAGGACCTT GTTTCCAGGT TTAAGGCAAG ACTTAAGACC AAAGAGGACA AGAATGCCTT TGCCAATATT CTGAGGAAGA TCTCAAAGAT ACAGAAGAAC GCTGGTTCTC AAAACTTCGT CGTTTTGAGA GAAAAGTGCG AATCCTGTTC TAACCGTCAA CCACGCAAGA TGGAACATGT GACTGAAGAC GAACTCCGCA GTGTTTTAAT GGAGACAAAA CAATTAACTA CACTGGAACT TGTTATGAGG TTTAAGGAAA GACTTACAAC CAGAGAGGAA AAGGATACAT TTGCCCATAT TCTCAAGAAG ATCGCAAAGT TACAGAAAAA CGCTGGTTCT CTAAAGTATT TTCTTGTTTT GAGAGAATGA 
Length1860
Protein Sequence
Protein Residue
Map Locationscaffold_6: 20891620.. 20895323
Download Sequence
A.thaliana
AGI-codeAT4G12610.2
Descriptiontranscription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors
TAIR curator summary
Alias[ATRAP74][RAP74]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg921768 Galactose oxidase/kelch repeat superfamily protein
5 Ahg324546 homeodomain GLABROUS 1
5.19615 Ahg472093 DNAJ heat shock N-terminal domain-containing protein
14.7309 Ahg488117 RNA helicase family protein
15.8114 Ahg491024 phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases
17.2916 Ahg486936 HEAT repeat-containing protein
19.1833 Ahg918994 Transcription factor TFIIE, alpha subunit
19.2873 Ahg951082 BAH domain ;TFIIS helical bundle-like domain
22.9129 Ahg491444 Protein kinase superfamily protein
23.4521 Ahg473785 RAB GTPASE HOMOLOG B18
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression